DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ninaA and cwc27

DIOPT Version :10

Sequence 1:NP_476656.1 Gene:ninaA / 33271 FlyBaseID:FBgn0002936 Length:237 Species:Drosophila melanogaster
Sequence 2:XP_002934241.3 Gene:cwc27 / 100145114 XenbaseID:XB-GENE-942796 Length:474 Species:Xenopus tropicalis


Alignment Length:169 Identity:69/169 - (40%)
Similarity:86/169 - (50%) Gaps:17/169 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    37 KKPVGRITFGLFGKLAPKTVANFRHICLRGINGTSYVGSRFHRVVDRFLVQGGDIVNGDGTGSIS 101
            |...|.|...|:.|.||:...||..:||.|.    |..:.|||||..|::|||| ..|.|||..|
 Frog    18 KTTAGEIDIELWSKEAPRACRNFVQLCLEGY----YDNTIFHRVVPDFIIQGGD-PTGTGTGGES 77

  Fly   102 IYGDYFPDEDKALAVEHNRPGYLGMANRGPDTNGCQFYVTTVGAKWLDGKHTVFGKVLEGMDTIY 166
            :||..|.||..: .:..||.|.:.|||.||..||.||:.|...|..|:.|||:.|||..  ||||
 Frog    78 VYGKPFRDEFHS-RLRFNRRGLVAMANAGPHDNGSQFFFTLGRADELNNKHTILGKVTG--DTIY 139

  Fly   167 AI---EDVKTDTDDFPVEPVVISNCGEIPTEQFEFYPDD 202
            .|   .:|....|:.||.|      .:|.|.:..|.|.|
 Frog   140 NILRLAEVDIGEDERPVNP------HKIKTTEVLFNPFD 172

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ninaANP_476656.1 cyclophilin 27..189 CDD:469651 64/154 (42%)
cwc27XP_002934241.3 cyclophilin_CeCYP16-like 8..178 CDD:238906 69/169 (41%)
PTZ00121 <283..>471 CDD:173412
CWC27_CTD 378..430 CDD:412084
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.