DRSC/TRiP Functional Genomics Resources

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Protein Alignment dbe and krr1

DIOPT Version :10

Sequence 1:NP_477240.1 Gene:dbe / 33269 FlyBaseID:FBgn0020305 Length:345 Species:Drosophila melanogaster
Sequence 2:XP_002939993.1 Gene:krr1 / 779544 XenbaseID:XB-GENE-1007979 Length:373 Species:Xenopus tropicalis


Alignment Length:355 Identity:209/355 - (58%)
Similarity:275/355 - (77%) Gaps:17/355 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSESE--------AEETKISTEPVDNAWSMKIP------AFRQEDNPHGMVEESSFATLFPKYRE 51
            |:|:|        .:..|..|:||:.:..:.:|      .|.:||||.|::||||||||||||||
 Frog     1 MAETEQSVGPNAKGKNKKRQTQPVEESELLTVPDGWKEDPFTKEDNPRGLLEESSFATLFPKYRE 65

  Fly    52 RYLKEVWPLVEQCLAEHHLKAELDLMEGSMVVKTSRKTWDPYIIIKARDMIKLMARSVPFEQAKR 116
            .||||.||||::.|.|..:||||||:||||.|.|::||:|||:|::|||:|||:|||||||||.|
 Frog    66 AYLKECWPLVQKALNESFVKAELDLIEGSMTVTTTKKTFDPYVIVRARDLIKLLARSVPFEQAVR 130

  Fly   117 VLQDDIGCDIIKIGNLVHKKEKFVKRRQRLIGPNGATLKSIELLTDCYVLVQGNTVSALGPYKGL 181
            :||||:.|||||||:||..:|:|:||||||:||.|:|||::||||:||::|||||||||||:.||
 Frog   131 ILQDDMACDIIKIGSLVRNRERFIKRRQRLLGPKGSTLKALELLTNCYIMVQGNTVSALGPFSGL 195

  Fly   182 QQVRDIVLETMNNVHPIYNIKALMIKRELMKDPRLANEDWSRFLPKFKNKNISKRKQPKVKKQKK 246
            ::||.:|.:||.|:|||||||||||||||.|||.|.::.|.||||:||:||:||||:||.|..||
 Frog   196 KEVRKVVWDTMKNIHPIYNIKALMIKRELAKDPELRSKSWERFLPQFKHKNVSKRKEPKKKSVKK 260

  Fly   247 EYTPFPPSQPESKVDKQLASGEYFLNQEQKQAKRNQERTEKQKEAAKRQDERRNKDFVPPTEESA 311
            :||||||.||||::||:||||||||.:.||:.|:.:|...||.||..::.|.|||.|:||.|:..
 Frog   261 DYTPFPPPQPESQIDKELASGEYFLKESQKRRKKLEEVKTKQAEAVTKRQEERNKAFIPPKEKPI 325

  Fly   312 ASSRKKEDGSSSSKVDVKALKAKLIKANKK 341
            .   |.:..|:|:|:||.|:|.|:.||..|
 Frog   326 T---KPQKASTSAKIDVNAIKDKVKKAKGK 352

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dbeNP_477240.1 KH-I_KRR1_rpt1 36..118 CDD:411821 58/81 (72%)
KH-I_KRR1_rpt2 122..214 CDD:411822 64/91 (70%)
krr1XP_002939993.1 KH-I_KRR1_rpt1 50..132 CDD:411821 58/81 (72%)
KH-I_KRR1_rpt2 136..228 CDD:411822 64/91 (70%)

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