DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG13950 and Lgals1

DIOPT Version :9

Sequence 1:NP_001334728.1 Gene:CG13950 / 33267 FlyBaseID:FBgn0031289 Length:316 Species:Drosophila melanogaster
Sequence 2:NP_063969.1 Gene:Lgals1 / 56646 RGDID:69355 Length:135 Species:Rattus norvegicus


Alignment Length:143 Identity:33/143 - (23%)
Similarity:48/143 - (33%) Gaps:48/143 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 GHVLIVSGRVKP-----------HPNKISLDLTDNVNAQNESETVFLKIEANFREGQIIRSMFQP 68
            |..|.|.|.:.|           ..|.:.|......||..::.|    |..|.::          
  Rat    15 GECLKVRGELAPDAKSFVLNLGKDSNNLCLHFNPRFNAHGDANT----IVCNSKD---------- 65

  Fly    69 GGGWQQEEISKNWKCDGPKNPLQPGQSFTFRVAVLQRCFEIYVND---QLYGSFEFVKFPKQ--- 127
            .|.|..|:....:       |.|||       ::.:.|......|   :|....|| |||.:   
  Rat    66 DGTWGTEQRETAF-------PFQPG-------SITEVCITFDQADLTIKLPDGHEF-KFPNRLNM 115

  Fly   128 --INYVRTYGDFE 138
              |||:...|||:
  Rat   116 EAINYMAADGDFK 128

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13950NP_001334728.1 None
Lgals1NP_063969.1 GLECT 11..135 CDD:214596 33/143 (23%)
Beta-galactoside binding. /evidence=ECO:0000250 45..49 0/3 (0%)
Beta-galactoside binding. /evidence=ECO:0000250 69..72 1/2 (50%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166344245
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3587
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11346
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.930

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