DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG13950 and Lgals12

DIOPT Version :10

Sequence 1:NP_608553.1 Gene:CG13950 / 33267 FlyBaseID:FBgn0031289 Length:316 Species:Drosophila melanogaster
Sequence 2:NP_062389.1 Gene:Lgals12 / 56072 MGIID:1929094 Length:314 Species:Mus musculus


Alignment Length:274 Identity:56/274 - (20%)
Similarity:99/274 - (36%) Gaps:50/274 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 GHVLIVSGRVKPHPNKISLDLTDNVNAQNESETVFLKIEANFR--EGQIIRSMFQPGGGWQQEEI 77
            |.::.:.|.|..|..:..:|.........:.:..| :....|.  :..:|.:..| ||.||:|  
Mouse    38 GKMVTLQGVVPLHARRFQVDFQCGCCLHPQPDVAF-RFSPRFYTVKPHVICNTHQ-GGLWQKE-- 98

  Fly    78 SKNWKCDGPKNPLQPGQSFTFRVAVLQRCFEIYVNDQLYGSFEFVKFP-KQINYVRTYGD----- 136
             ..|    |...||.|.||...........::.||.|.:..:.: :.| .:::.:...||     
Mouse    99 -IRW----PGVALQRGDSFLILFLFENEEVKVSVNGQHFLHYRY-RLPLSRVDTLDISGDILVKA 157

  Fly   137 --FEKITQF-HHRMLFPLVFPRTLMCPD-KVAFQSDVPRRYETGTVVAMECIAKGPP-------- 189
              |..|..| .....:|:.:|..|..|. :|.....:||....|.|:.:..:....|        
Mouse   158 V
GFLNINPFVEGSREYPVGYPFLLYSPRLEVPCSRALPRGLWPGQVIVVRGLVLKEPKDFTLSLK 222

  Fly   190 --TTEFSICFQCNDTGRTVLRFHVNFDRTTVSRSYQREDNSFALSDEETEGEFPFVRGKLFKIAF 252
              ||...:..:.:.|.||:         ..|| |:.|:        :.....|.|...:.|::..
Mouse   223 DGTTHVPVTLRASFTDRTL---------AWVS-SWGRK--------KLISAPFLFHPQRFFEVLL 269

  Fly   253 GLGDRAFLIAVNGQ 266
            ...:....:|:|||
Mouse   270 LCQEGGLKLALNGQ 283

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13950NP_608553.1 Gal-bind_lectin 10..144 CDD:459768 30/139 (22%)
Gal-bind_lectin 170..299 CDD:459768 21/107 (20%)
Lgals12NP_062389.1 Gal-bind_lectin 33..158 CDD:459768 27/129 (21%)
Gal-bind_lectin 195..313 CDD:214904 21/107 (20%)

Return to query results.
Submit another query.