DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG13950 and grifin

DIOPT Version :9

Sequence 1:NP_001334728.1 Gene:CG13950 / 33267 FlyBaseID:FBgn0031289 Length:316 Species:Drosophila melanogaster
Sequence 2:NP_001003430.1 Gene:grifin / 445036 ZFINID:ZDB-GENE-040801-163 Length:139 Species:Danio rerio


Alignment Length:138 Identity:29/138 - (21%)
Similarity:47/138 - (34%) Gaps:47/138 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 GHVLIVSGRVKPHPNKISLD-LTDNVNAQNESETVFLKIEANFREGQIIRSMFQPGGGWQQEEIS 78
            |..:|:.|...|..:|..:: |.|      ..:.|.......|.|..||.:.:. ...|.|||  
Zfish    16 GWSVILKGETPPEASKFEINFLCD------RDDRVAFHFNPRFTESDIICNSYM-ANRWGQEE-- 71

  Fly    79 KNWKCD----GPKNPLQPGQSFTFRVAVLQRCFEIYVNDQLYGSFEFVKFPKQINYVRTYGDFEK 139
               :|:    |.:.|.|               .|||.::               ::...|.|..|
Zfish    72 ---RCNHFPLGVEEPFQ---------------IEIYSDN---------------DHFHVYIDKAK 103

  Fly   140 ITQFHHRM 147
            :.|:.||:
Zfish   104 VMQYKHRV 111

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13950NP_001334728.1 None
grifinNP_001003430.1 Gal-bind_lectin 10..132 CDD:214904 29/138 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3587
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11346
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
43.870

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