DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG13950 and Lgalsl

DIOPT Version :9

Sequence 1:NP_001334728.1 Gene:CG13950 / 33267 FlyBaseID:FBgn0031289 Length:316 Species:Drosophila melanogaster
Sequence 2:NP_001128202.1 Gene:Lgalsl / 360983 RGDID:1307414 Length:172 Species:Rattus norvegicus


Alignment Length:143 Identity:36/143 - (25%)
Similarity:67/143 - (46%) Gaps:29/143 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 VPF-GHV---------LIVSGRVKPHPNKISLDLTDNVNAQNESETVFLKIEANFREGQIIRSMF 66
            ||| ||:         ::|.|.|..:|...::.||.. ::::....|.::::|.|.:.|::|:..
  Rat    38 VPFCGHIKGGMRPGKKVLVMGIVDLNPESFAISLTCG-DSEDPPADVAIELKAVFTDRQLLRNSC 101

  Fly    67 QPG-GGWQQEEISKNWKCDGPKNPLQPGQSFTFRVAVLQRC----FEIYVN-DQLYGSFEFVKFP 125
            ..| .|.:|..|        |..|..|.|  .|||.:|  |    |.::|: .||:..:..::..
  Rat   102 ISGERGEEQSAI--------PYFPFIPDQ--PFRVEIL--CEHPRFRVFVDGHQLFDFYHRIQTL 154

  Fly   126 KQINYVRTYGDFE 138
            ..|:.::..||.:
  Rat   155 SAIDTIKINGDLQ 167

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13950NP_001334728.1 None
LgalslNP_001128202.1 Gal-bind_lectin 46..170 CDD:214904 31/135 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3587
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11346
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.910

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