DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG13950 and M6.11

DIOPT Version :9

Sequence 1:NP_001334728.1 Gene:CG13950 / 33267 FlyBaseID:FBgn0031289 Length:316 Species:Drosophila melanogaster
Sequence 2:NP_001256974.1 Gene:M6.11 / 13219106 WormBaseID:WBGene00206478 Length:139 Species:Caenorhabditis elegans


Alignment Length:140 Identity:29/140 - (20%)
Similarity:53/140 - (37%) Gaps:28/140 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 LTEVPFGHVLIVSGRVKPHPNKISLDLTDNVNAQN------ESETVFLKIEANFREGQIIRSMFQ 67
            :.::||..|.......||...:.....|.....||      .|:.:.:.||.|....:::.:...
 Worm     1 MNKIPFPKVPQTLKIYKPIRPRTRFLFTGRCETQNFSIALISSQEIAMFIEFNLENTKLVSAKSF 65

  Fly    68 PGGGWQQEEISKNWKCDGPKNPLQPGQSFTFRVAVLQRCFEIYVNDQLYGSFEF-VKFPKQINYV 131
            ....|.:|.::        |||:|...:|..::......||::..    |:|.| :|:...:   
 Worm    66 SSKTWSREVLA--------KNPIQQNDTFFIQIITTNDHFEVFSG----GTFIFSLKYTVPL--- 115

  Fly   132 RTYGDFEKIT 141
                  ||||
 Worm   116 ------EKIT 119

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13950NP_001334728.1 None
M6.11NP_001256974.1 GLECT 12..123 CDD:294054 26/129 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3587
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11346
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.910

Return to query results.
Submit another query.