DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG13950 and Lgals8

DIOPT Version :10

Sequence 1:NP_608553.1 Gene:CG13950 / 33267 FlyBaseID:FBgn0031289 Length:316 Species:Drosophila melanogaster
Sequence 2:NP_446314.2 Gene:Lgals8 / 116641 RGDID:621272 Length:316 Species:Rattus norvegicus


Alignment Length:329 Identity:73/329 - (22%)
Similarity:119/329 - (36%) Gaps:83/329 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 GHVLIVSGRVKPHPNKISLDLTDNVNAQNESETVFLKIEANFREGQIIRSMFQPGGGWQQEEISK 79
            |.::::.|.|.....:..:|.....:.:..::..| .....|:....|.........|..|||:.
  Rat    29 GSLIVIRGHVPKDSERFQVDFQHGNSLKPRADVAF-HFNPRFKRSNCIVCNTLTNEKWGWEEITH 92

  Fly    80 NWKCDGPKNPLQPGQSFTFRVAVLQRCFEIYVNDQLYGSFEFVKFPKQIN--YVRTYGDFEKITQ 142
            :.       |.:..:||...:.||:..|::.||.:     ..:.:..:||  .:.|.|.:.|:. 
  Rat    93 DM-------PFRKEKSFEIVIMVLKNKFQVAVNGK-----HILLYAHRINPEKIDTLGIYGKVN- 144

  Fly   143 FHHRMLFPLVFPRTLMCPDKVAFQSDVPRRYETGTV----VAMECIAKGPPTTEFSICFQCN--- 200
             .|.:.|              .|.||: :..||.|:    ::.|.|.|. .....|:.|:..   
  Rat   145 -IHSI
GF--------------RFSSDL-QSMETSTLGLTQISKENIQKS-GKLHLSLPFEARLNA 192

  Fly   201 --DTGRTV------------------------LRFHVNFDRTTVSRSYQREDNSFALSDEETEGE 239
              ..||||                        :..|:| .|..| :::.|  ||| |.|...|.|
  Rat   193 SMGPGRTVVVKGEVNTNAKSFNVDLVAGRSRDIALHLN-PRLNV-KAFVR--NSF-LQDAWGEEE 252

  Fly   240 -----FPFVRGKLFKIAFGLGDRAFLIAVNGQYFTYYNFPGRPF-SISTLKCFTNEVGDFAVRSL 298
                 |||..|..|::......|.|.:||||.:...|....:.. ||.||..      |..:|.|
  Rat   253 RNITCFPFSSGMYFEMIIYCDVREFKVAVNGVHSLEYKHRFKDLSSIDTLAV------DGDIRLL 311

  Fly   299 EYHS 302
            :..|
  Rat   312 DVRS 315

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13950NP_608553.1 Gal-bind_lectin 10..144 CDD:459768 24/130 (18%)
Gal-bind_lectin 170..299 CDD:459768 42/167 (25%)
Lgals8NP_446314.2 Gal-bind_lectin 24..148 CDD:214904 25/133 (19%)
Gal-bind_lectin 194..313 CDD:214904 35/129 (27%)

Return to query results.
Submit another query.