DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG13950 and lgals1.3

DIOPT Version :10

Sequence 1:NP_608553.1 Gene:CG13950 / 33267 FlyBaseID:FBgn0031289 Length:316 Species:Drosophila melanogaster
Sequence 2:NP_001135709.1 Gene:lgals1.3 / 100216286 XenbaseID:XB-GENE-5849758 Length:135 Species:Xenopus tropicalis


Alignment Length:122 Identity:30/122 - (24%)
Similarity:51/122 - (41%) Gaps:15/122 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 GHVLIVSGRVKPHPNKISLDLTDNVNAQNESETVFLKIEANFREGQIIRSMFQPG-GGWQQEEIS 78
            ||.:.|.||:.....:.::|:  ..:|:|.......:.|.:..:..||.:..|.| .|.:|:|.:
 Frog    17 GHRVEVRGRILKDTKRFAVDM--GADAENLIMHCNPRFEFSVDKNTIIFNSKQNGVWGTEQKETA 79

  Fly    79 KNWKCDGPKNPLQPGQSFTFRVAVLQRCFEIYVNDQLYGSFEFVKFP-KQINYVRTY 134
                     .|.|.| |.|..:...:.|..:.:.|.....|. .:|| ..|||:..|
 Frog    80 ---------FPFQAG-SETMLIFEFEDCITVLLPDGTEVPFT-CRFPIDVINYLALY 125

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13950NP_608553.1 Gal-bind_lectin 10..144 CDD:459768 30/122 (25%)
Gal-bind_lectin 170..299 CDD:459768
lgals1.3NP_001135709.1 GLECT 13..135 CDD:214596 30/122 (25%)
Blue background indicates that the domain is not in the aligned region.

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