DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG13950 and lgals9

DIOPT Version :10

Sequence 1:NP_608553.1 Gene:CG13950 / 33267 FlyBaseID:FBgn0031289 Length:316 Species:Drosophila melanogaster
Sequence 2:XP_012811742.1 Gene:lgals9 / 100124899 XenbaseID:XB-GENE-5813327 Length:316 Species:Xenopus tropicalis


Alignment Length:344 Identity:73/344 - (21%)
Similarity:117/344 - (34%) Gaps:95/344 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 VPF----------GHVLIVSGRVKPHPNKISLDLTDNVNAQ---NESETVFLKIEANFREGQIIR 63
            |||          |.::::||.|.|..::.      |:|.|   :.::.|.......|.:|.|:.
 Frog    11 VPFTLPLSHGLHDGFLVVISGVVCPSGDRF------NINFQCGHSSNDDVAFHFNPRFIDGGIVV 69

  Fly    64 SMFQPGGGWQQEEISKNWKCDGPKNPLQPGQSFTFRVAVLQRCFEIYVNDQLYGSFEFVKFPKQI 128
            ...:....|.:||..:       :.|....|.|..|:.|....:.:.||..     .||::..:|
 Frog    70 CNTKERNSWGREENKR-------EMPFHRHQPFEIRILVSNHSYNVSVNRN-----HFVEYHHRI 122

  Fly   129 NYVR----TYGDFEKITQFH---------------------HRMLFPLVFPRTLMCPDKVAFQSD 168
            ...|    |.|....:|..|                     |:   |...|:..  |...||...
 Frog   123 PIQRVNTLTIGGCVNLTCVHVQQQGGGFPPQHFPGAPTFSPHQ---PGYLPQQF--PPGGAFNPQ 182

  Fly   169 V---PRRYET---------------GTVVAMECIAKGPPTTEFSICFQCNDTGRTVLRFHVNFDR 215
            |   |  |:|               |||.|      .|.....::.|.    |.|.|.|:..||.
 Frog   183 VYAIP--YQTKIHGGFFPSKMIAVRGTVPA------HPKRFHLNLKFH----GGTALHFNPRFDE 235

  Fly   216 TTVSRSYQREDNSFALSDEETEGEFPFVRGKLFKIAFGLGDRAFLIAVNGQYFTYYNFPGRPFSI 280
            .|:.|: ...:.|:...:........|..|:.|.|.......||.:.|||.:...:|.  |..|:
 Frog   236 HTIVRN-SHLNGSWGKEERNLPSGMVFSPGQSFVIEIRCEQHAFKVHVNGAHICDFNH--RVHSL 297

  Fly   281 STLKCFTNEVGDFAVRSLE 299
            ..:.....| ||..::.::
 Frog   298 QQIDTLQIE-GDVVLQHVQ 315

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13950NP_608553.1 Gal-bind_lectin 10..144 CDD:459768 32/148 (22%)
Gal-bind_lectin 170..299 CDD:459768 33/143 (23%)
lgals9XP_012811742.1 GLECT 12..142 CDD:238025 31/147 (21%)
GLECT 187..315 CDD:238025 33/143 (23%)

Return to query results.
Submit another query.