DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment kraken and AT1G52750

DIOPT Version :10

Sequence 1:NP_477265.1 Gene:kraken / 33265 FlyBaseID:FBgn0020545 Length:331 Species:Drosophila melanogaster
Sequence 2:NP_175684.3 Gene:AT1G52750 / 841708 AraportID:AT1G52750 Length:633 Species:Arabidopsis thaliana


Alignment Length:175 Identity:35/175 - (20%)
Similarity:58/175 - (33%) Gaps:47/175 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 PLQLLGEDSWEEFSIAVPWGTVEAKWWGSKERQPIIALHG-------WQDNCGSFDRLCPLLPAD 87
            |:.|..:|...:.: ::..|....|    .|...|:.:||       |:...|...     |...
plant   327 PISLFDKDGVNQIN-SIKLGDDMEK----DENTGIVLVHGFGGGVFSWRHVMGELS-----LQLG 381

  Fly    88 TSILAIDLPGHGKSSH--------------YPMGMQYFIFWDGICLIRRIVRKYNWKNVTLLGHS 138
            ..::|.|.||.|.:|.              |.:..|       :.|:.....:..:.:|.|:||.
plant   382 CRVVAYDRPGWGLTSRLIRKDWEKRNLANPYKLESQ-------VDLLLSFCSEMGFSSVILVGHD 439

  Fly   139 LGGALTFMYAASFPTEVEK---------LINIDIAGPTVRGTQRM 174
            .||.|....|........|         |||:.::...|....|:
plant   440 DGGLLALKAAERMQASTSKHNITIKGVVLINVSLSREVVPAFARI 484

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
krakenNP_477265.1 MenH 60..331 CDD:440361 30/145 (21%)
AT1G52750NP_175684.3 MenH 356..623 CDD:440361 29/141 (21%)

Return to query results.
Submit another query.