DRSC/TRiP Functional Genomics Resources

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Protein Alignment kraken and PPH

DIOPT Version :10

Sequence 1:NP_477265.1 Gene:kraken / 33265 FlyBaseID:FBgn0020545 Length:331 Species:Drosophila melanogaster
Sequence 2:NP_001330304.1 Gene:PPH / 831225 AraportID:AT5G13800 Length:507 Species:Arabidopsis thaliana


Alignment Length:339 Identity:76/339 - (22%)
Similarity:107/339 - (31%) Gaps:131/339 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 LSPETNGQTEEPLQLLGEDSWEEFSIAVPWGTVEAKWWGSKERQPIIALHGWQDNCGSFDRLCPL 83
            |..|:||:                 ||........:|      :|.:.:|..:..|.:.|     
plant   102 LPDESNGE-----------------IAARISHSHCEW------KPKLRVHYEKAGCDNLD----- 138

  Fly    84 LPADTSILAIDLPGHGKSS-HY-----PMGMQYFIFWDGICLIRRIVRKYNWKNVTLLGHSLGGA 142
            .||     .:.|||.|..| ||     .:|..|.:                |. :..||..|   
plant   139 APA-----VLFLPGFGVGSFHYEKQLTDLGRDYRV----------------WA-IDFLGQGL--- 178

  Fly   143 LTFMYAASFPTEVEKLINIDIAGPTVRGTQRMAEGTGRALDK-----FLDYETLPESKQPCYSYD 202
                   |.|||          .||.     |.|.|..:.||     |.| :|.|.:.|..:|.|
plant   179 -------SLPTE----------DPTT-----MTEETSSSEDKEPFWGFGD-KTEPWADQLVFSLD 220

  Fly   203 EMIKLVLDAYDGSVDEPSVRVLMNRGMRHNPSKNGYL---FAR---DLRLKVSLL------GMF- 254
            .....|....:..:.|| |.:..|       |..||:   ||.   .|...|:||      |.| 
plant   221 LWRDQVQYFVEEVIGEP-VYIAGN-------SLGGYVALYFAATHPHLVKGVTLLNATPFWGFFP 277

  Fly   255 --TAEQTLAY------ARQIRCRVLNIRGIPGMKFETPQVYADVIATLRENAAKVVYVEVPGTHH 311
              .....||.      |..:..||..|..:...|...|:..|:::        |.||.:      
plant   278 NPVRSPKLARLFPWPGAFPLPERVKKITELVWQKISDPESIAEIL--------KQVYTD------ 328

  Fly   312 LHLVTPDRVAPHII 325
             |.:..|:|...|:
plant   329 -HSINVDKVFSRIV 341

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
krakenNP_477265.1 MenH 60..331 CDD:440361 69/298 (23%)
PPHNP_001330304.1 PLN02578 116..434 CDD:215315 70/308 (23%)

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