DRSC/TRiP Functional Genomics Resources

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Protein Alignment kraken and AT4G12830

DIOPT Version :10

Sequence 1:NP_477265.1 Gene:kraken / 33265 FlyBaseID:FBgn0020545 Length:331 Species:Drosophila melanogaster
Sequence 2:NP_567394.1 Gene:AT4G12830 / 826895 AraportID:AT4G12830 Length:393 Species:Arabidopsis thaliana


Alignment Length:172 Identity:37/172 - (21%)
Similarity:66/172 - (38%) Gaps:20/172 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    48 WGTVEAKWWGSKERQPIIALHGWQDNCGSFDRLCPLLPADTSILAIDLPGHGKSSHYPMGMQY-F 111
            |.:||:   ||.:..|:|.:||:.....|:.:..|:|..:...:|.|..|.|.|.....|..: :
plant   123 WFSVES---GSVDSPPVILIHGFPSQAYSYRKTIPVLSKNYRAIAFDWLGFGFSDKPQAGYGFNY 184

  Fly   112 IFWDGICLIRRIVRKYNWKNVTLLGHSLGGALTFMYAASFPTEVEKLINIDIAGPTVRGTQRMAE 176
            ...:.:..:...:.:.....|:|:......|....||.:.|.:::.||   :..|.:........
plant   185 TMDEFVSSLESFIDEVTTSKVSLVVQGYFSAAVVKYARNRPDKIKNLI---LLNPPLTPEHAKLP 246

  Fly   177 GTGRALDKFL-----DYETLPESKQP---CYSY-----DEMI 205
            .|......||     ..:.|..|.:|   |..|     |.|:
plant   247 STLSVFSNFLLGEIFSQDPLRASDKPLTSCGPYKMKEDDAMV 288

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
krakenNP_477265.1 MenH 60..331 CDD:440361 32/160 (20%)
AT4G12830NP_567394.1 PLN03084 1..389 CDD:178633 37/172 (22%)

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