DRSC/TRiP Functional Genomics Resources

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Protein Alignment kraken and AT2G18360

DIOPT Version :10

Sequence 1:NP_477265.1 Gene:kraken / 33265 FlyBaseID:FBgn0020545 Length:331 Species:Drosophila melanogaster
Sequence 2:NP_565437.1 Gene:AT2G18360 / 816351 AraportID:AT2G18360 Length:313 Species:Arabidopsis thaliana


Alignment Length:168 Identity:39/168 - (23%)
Similarity:64/168 - (38%) Gaps:31/168 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 ELSPETNGQTEEPLQLLGEDSWEEFSIAVPWGTVEAKWWGSKERQPIIA-LHG--------WQDN 73
            ||.|.|......|.:.|.:....:.:.||.         ..|..:|::. :||        ||..
plant    27 ELEPGTKMNFWIPKETLKKTKKSDKNFAVE---------PQKPTKPVLLFIHGFAAEGIVTWQFQ 82

  Fly    74 CGSFDRLCPLLPADTSILAIDLPGHGKSSHYPMGMQYFIFWDGICLIRRIVRKYNWKNVTLLGHS 138
            .||       |....|:...||...|.|  |.........:...||::.: |....:..||:|.|
plant    83 VGS-------LAKKYSVYIPDLLFFGGS--YSDNADRSPAFQAHCLVKSL-RILGIEKFTLVGFS 137

  Fly   139 LGGALTFMYAASFPTEVEKLINIDIAGPTVRGTQRMAE 176
            .||.:.|..|..:|..|:.::   ::|..:..|..::|
plant   138 YGGMVAFKIAEEYPEMVQAMV---VSGSILAMTDTISE 172

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
krakenNP_477265.1 MenH 60..331 CDD:440361 30/126 (24%)
AT2G18360NP_565437.1 MenH 60..309 CDD:440361 30/126 (24%)

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