DRSC/TRiP Functional Genomics Resources

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Protein Alignment kraken and serhl

DIOPT Version :10

Sequence 1:NP_477265.1 Gene:kraken / 33265 FlyBaseID:FBgn0020545 Length:331 Species:Drosophila melanogaster
Sequence 2:NP_955909.2 Gene:serhl / 322648 ZFINID:ZDB-GENE-030131-1368 Length:326 Species:Danio rerio


Alignment Length:296 Identity:99/296 - (33%)
Similarity:157/296 - (53%) Gaps:16/296 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    41 EFSIAVPWGTVEAKWWGSKERQPIIALHGWQDNCGSFDRLCPLLPADTSILAIDLPGHGKSSHYP 105
            ||.:.||||.:..:.||....:|::.||||.||.|:|:.|.||||.|...:|||.||||.|||.|
Zfish    22 EFRMPVPWGELRGQVWGPSHGRPVLCLHGWADNSGTFNTLVPLLPNDWRFVAIDFPGHGLSSHRP 86

  Fly   106 MGMQY-FIFWDGICLIRRIVRKYNWKNVTLLGHSLGGALTFMYAASFPTEVEKLINIDIAGPTVR 169
            .|..| |.|:  :..:||:|....||..:::|||:||.:..|::|.:|..||.::.:|..|....
Zfish    87 DGCFYAFPFY--VADVRRVVEALQWKRFSIIGHSMGGNVAGMFSALYPEMVESVVLLDTYGFLPT 149

  Fly   170 GTQRMAEGTGRALDKFLDYETLP-ESKQPCYSYD---EMIKLVLDAYDGSVDEPSVRVLMNRGMR 230
            ....|.....:.::..:.|:.:. |.|:..|:|:   |.:| |.:.|   :.:.|..:|:.|.:|
Zfish   150 EVTDMFTNMRKGINDQIQYDNMANERKERVYTYEKAKERLK-VANPY---LSDQSADILLERAVR 210

  Fly   231 HNPSKNGYLFARDLRLKVSLLGMFTAEQTLAYARQIRCRVLNIRGIPGM--KFETPQVYADVIAT 293
            .  ...|::|.||.|:.:..:.....:|.|....|::.:|:.:....|:  .|..|..|||.|..
Zfish   211 E--VDGGFVFTRDFRINLKNIIYINIDQCLHVLSQVKAKVMLLLAKDGLFKTFTLPDGYADRICK 273

  Fly   294 LRENAAKVVYVEVPGTHHLHLVTPDRVAPHIIRFLK 329
            ...: .|..:|||.|.||:||..|:.|:..|..||:
Zfish   274 SWTD-QKATFVEVEGDHHVHLNNPEAVSSVITDFLQ 308

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
krakenNP_477265.1 MenH 60..331 CDD:440361 91/277 (33%)
serhlNP_955909.2 MenH 20..308 CDD:440361 98/294 (33%)

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