DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment kraken and abhd6

DIOPT Version :10

Sequence 1:NP_477265.1 Gene:kraken / 33265 FlyBaseID:FBgn0020545 Length:331 Species:Drosophila melanogaster
Sequence 2:NP_001120619.1 Gene:abhd6 / 100145783 XenbaseID:XB-GENE-966285 Length:338 Species:Xenopus tropicalis


Alignment Length:298 Identity:63/298 - (21%)
Similarity:110/298 - (36%) Gaps:96/298 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    57 GSKERQP-IIALHGWQDNCGSFDRLCPLLPADTSILAIDLPGHGKSSHYPMGMQYFI-------- 112
            |....:| ::.|||:..:...:..:...||.:..::.:|:|||..::..|:. .|.|        
 Frog    66 GKPGNKPSVLMLHGFSAHKDMWLSVVKFLPKNLHLVCVDMPGHEGTTRSPLD-DYSISGQVKRIH 129

  Fly   113 -FWDGICLIRRIVRKYNWKNVTLLGHSLGGALTFMYAASFPTEVEKLINIDIAG---PT------ 167
             |.:.|.|        |.|...|:|.|:||.:..:|||.:||::..|..|..||   |.      
 Frog   130 QFVESIGL--------NKKPFHLVGTSMGGNVAGVYAAQYPTDISSLTLICPAGLDYPNDSTFLK 186

  Fly   168 -VRGTQRMAEGTGRALDKFLDYETLPESKQPCYSYDEMI--------KLVLDAYDGSVDEPSVRV 223
             ::|.::.:.          |.:.:|..........||:        |:......|.||   ||:
 Frog   187 HLKGLEKSSP----------DDQRIPLIPSTATEMQEMLRLCSFVRFKIPQQVLQGLVD---VRI 238

  Fly   224 ------------LMNRGMRHNPSKNGYLFARDLRLKVSLLGMFTAEQTLAYARQIRCRVLNIRG- 275
                        |::...||:..:|              :|...|...:.:.:|  .:||::.| 
 Frog   239 PHNEFYRRLFLALVDEKSRHSLHEN--------------MGKIVAPTQIIWGKQ--DQVLDVSGT 287

  Fly   276 ------IPGMKFETPQVYADVIATLRENAAKVVYVEVP 307
                  |.|.:.|           :.||....|.:|.|
 Frog   288 EVLAGSIRGCQVE-----------ILENCGHSVVMERP 314

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
krakenNP_477265.1 MenH 60..331 CDD:440361 62/295 (21%)
abhd6NP_001120619.1 MenH 51..328 CDD:440361 63/298 (21%)

Return to query results.
Submit another query.