DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment drongo and GLO3

DIOPT Version :9

Sequence 1:NP_001162848.1 Gene:drongo / 33263 FlyBaseID:FBgn0020304 Length:673 Species:Drosophila melanogaster
Sequence 2:NP_011048.1 Gene:GLO3 / 856859 SGDID:S000000924 Length:493 Species:Saccharomyces cerevisiae


Alignment Length:570 Identity:121/570 - (21%)
Similarity:198/570 - (34%) Gaps:189/570 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 NRQCFDCGQKGPTYVNMTIGSFVCTRCSGVLRGLTPPHR--------VKSISMATFTQDEIDFLR 83
            ||.|||||.|.||:.::..|..:|.:||.|       ||        |||.::..:|.:.:...:
Yeast    28 NRVCFDCGNKNPTWTSVPFGVMLCIQCSAV-------HRNMGVHITFVKSSTLDKWTINNLRRFK 85

  Fly    84 SHGNELCAKTWLGLWDPKRAVHQQEQRELMMDKYERKRYYLEPASPLKSLANAVNLKSSAPATNH 148
            ..||                             ::.:.::|:...  |.|.|..|:.:....|:.
Yeast    86 LGGN-----------------------------HKARDFFLKNNG--KQLLNTANVDAKTKYTSP 119

  Fly   149 TQNGHQNGYASIHLTPPAAQRTSANGLQKVAN--SSSNSSGKTSSSISRPHYNHQNNSQNNNHDA 211
            ....::     |||.....:.......:.|.|  .||:|...|.|..||      :.|:.|:.|.
Yeast   120 VAKKYK-----IHLDKKVQKDMELYPSELVLNGQDSSDSPLDTDSDASR------STSKENSVDD 173

  Fly   212 FGLGGGLSSLNSAG--STSTGALSDTSSCASNGFGADCDFVADFGSANIFDATSARS---TGS-- 269
            |.......|.||:.  :.:||:|:..::..              ||......|..||   |.|  
Yeast   174 FFSNWQKPSSNSSSKLNVNTGSLAPKNNTT--------------GSTPKTTVTKTRSSILTASRK 224

  Fly   270 -PAVSSVS----SVGSSN------GYAKVQPIRAAHL--------QQQQQ-----------LQQQ 304
             |.::|..    |:.||:      ...||...:|..|        ||:::           ::|.
Yeast   225 KPVLNSQDKKKHSILSSSRKPTRLTAKKVDKSQAEDLFDQFKKEAQQEKEDEFTNSSSSTKIRQN 289

  Fly   305 LHQQQLLNGNGHQGTENFADFDHAPIYNAVAPPTFNDWISDWSRRGFHDPFDDCDDSPPGARPPA 369
            .:..|.:|.:......:..|.:       ..|..|||:::|.|     :.||             
Yeast   290 DYDSQFMNNSKGNNNNSIDDIN-------TQPDEFNDFLNDTS-----NSFD------------- 329

  Fly   370 PAPAPAQVPAVSSPLPTVREEPE--LAWNF--------WEDEMRIEAQEKESQTKQPELGYSFSI 424
                            |.|:|.:  |...|        ..|...:..|:||||.......|:..|
Yeast   330 ----------------TTRKEQQDTLTPKFAKLGFGMTMNDANDLAKQQKESQKIAQGPRYTGRI 378

  Fly   425 S----TTTPLSPSNPFLPYLVSEEQHRN-HPEKPSFSYSLFSSISNSSQ--EDQADDHEMNVLNA 482
            :    |...:|....|......|..:|. |.:..:|..:  :|||:||.  ||:..|...|.:|:
Yeast   379 AERYGTQKAISSDQLFGRGSFDEAANREAHDKLKTFDNA--TSISSSSYFGEDKEVDEFGNPINS 441

  Fly   483 ------NFHDFFTWSAPLQNGHTTSPPKGGNAAMAPSEDRYAALKDLDEQ 526
                  ||           :|..::  .|.....|.::|....|:|:.||
Yeast   442 SGSGAGNF-----------DGRNSN--NGFIDFNASADDELQMLRDVVEQ 478

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
drongoNP_001162848.1 ArfGap 15..126 CDD:279720 24/106 (23%)
GLO3NP_011048.1 COG5347 9..363 CDD:227651 88/438 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5347
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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