DRSC/TRiP Functional Genomics Resources

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Protein Alignment drongo and GCS1

DIOPT Version :9

Sequence 1:NP_001162848.1 Gene:drongo / 33263 FlyBaseID:FBgn0020304 Length:673 Species:Drosophila melanogaster
Sequence 2:NP_010055.1 Gene:GCS1 / 851372 SGDID:S000002385 Length:352 Species:Saccharomyces cerevisiae


Alignment Length:385 Identity:91/385 - (23%)
Similarity:149/385 - (38%) Gaps:96/385 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 LLALRELVASGTGSNRQCFDCGQKGPTYVNMTIGSFVCTRCSGVLRGL-TPPHRVKSISMATFTQ 76
            ||.|:::     |:|::|.|||...|.:.....|:|:|..|:|:.||| .....|:||:|..|..
Yeast    14 LLQLQKI-----GANKKCMDCGAPNPQWATPKFGAFICLECAGIHRGLGVHISFVRSITMDQFKP 73

  Fly    77 DEI------------DFLRSHGNELCAKTWLGLWDPKRAVHQQEQRELMMDKYERKRYYLE-PAS 128
            :|:            ::.:||..:|.....:...:|....::::...|..|:...:|.:|: .||
Yeast    74 EELLRMEKGGNEPLTEWFKSHNIDLSLPQKVKYDNPVAEDYKEKLTCLCEDRVFEEREHLDFDAS 138

  Fly   129 PLKSLANAVNLKSSAPATNHTQNGHQNGYASIHLTP-----PAAQRTSANG--LQKVANSSSNSS 186
            .|.  |.:....|:.|....::.|          ||     .|....|:||  .||..|.:..:.
Yeast   139 KLS--ATSQTAASATPGVAQSREG----------TPLENRRSATPANSSNGANFQKEKNEAYFAE 191

  Fly   187 -GKTSSSISRPHYNHQNNSQNNNHDAFG-LGGGLSSLNSAGSTSTGAL----SDTSSCASNGFGA 245
             ||.:.  |||  :|...||...:..|| .........||||::|.:|    :|.....|.|:|.
Yeast   192 LGKKNQ--SRP--DHLPPSQGGKYQGFGSTPAKPPQERSAGSSNTLSLENFQADPLGTLSRGWGL 252

  Fly   246 DCDFVADFGSANIFDATSARSTGSPAVSSVSSVGSSNGYAKVQPIRAAHLQQQQ--QLQQQLHQQ 308
                   |.||              ...|...|..:    .::|    |:||.|  :|.::..:.
Yeast   253 -------FSSA--------------VTKSFEDVNET----VIKP----HVQQWQSGELSEETKRA 288

  Fly   309 QLLNGNGHQ-----GTENFADFDHAPIYNAVAPPTFNDWISDWSRRG--FHDPFDDCDDS 361
            ....|...|     |.:.|::|          ...||....|.|..|  .|..:...|::
Yeast   289 AAQFGQKFQETSSYGFQAFSNF----------TKNFNGNAEDSSTAGNTTHTEYQKIDNN 338

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
drongoNP_001162848.1 ArfGap 15..126 CDD:279720 30/124 (24%)
GCS1NP_010055.1 COG5347 4..350 CDD:227651 91/385 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5347
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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