DRSC/TRiP Functional Genomics Resources

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Protein Alignment drongo and smap1

DIOPT Version :9

Sequence 1:NP_001162848.1 Gene:drongo / 33263 FlyBaseID:FBgn0020304 Length:673 Species:Drosophila melanogaster
Sequence 2:XP_021336343.1 Gene:smap1 / 777731 ZFINID:ZDB-GENE-060920-2 Length:483 Species:Danio rerio


Alignment Length:399 Identity:92/399 - (23%)
Similarity:149/399 - (37%) Gaps:108/399 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 KKQDDKYLLALRELVASGTGSNRQCFDCGQKGPTYVNMTIGSFVCTRCSGVLRGL-TPPHRVKSI 69
            :|.::::...|.:::..  ..|:.|.||..|||.:.:..:|.|:|.||:|:.|.| ....||||:
Zfish    11 QKLNEQHQAILSKMLRE--DDNKYCADCEAKGPRWASWNLGVFICIRCAGIHRNLGVHISRVKSV 73

  Fly    70 SMATFTQDEIDFLRSHGNELCAKTWLGLWDP------KRAVHQQEQRELMMDKYERKRYY----- 123
            ::..:|.::|..::|.||....:    |::.      :|....|.....:.||||||:||     
Zfish    74 NLDQWTPEQIQSVQSMGNTKARQ----LYEAHLPENFRRPQTDQAVEFFIRDKYERKKYYDKNSV 134

  Fly   124 -----------LEPASPLKSLANAVNL------------------KSSAPATNHTQNGHQNGYAS 159
                       ...:||....|....|                  |.:.||.  .:...::....
Zfish   135 NGAIKSSDAALPSVSSPSSQAAEKSKLEKEREKKKEEKKREKDTDKENKPAV--LEKKREDNQID 197

  Fly   160 IHLTPPAAQRTSAN--GLQKVANSSSNSSGKTSSS-------------ISRPHYNHQNNSQNNNH 209
            ..::|..:...:.:  ||......|::|...|||:             :|.|..::.|:||.::.
Zfish   198 SRISPKKSAEPAIDLLGLDAPTVGSASSGAGTSSAAPISDDLDIFGPMVSNPLPSNSNSSQVSSS 262

  Fly   210 DAFGLGGGLSSLNSAGSTSTGALSDTSSCASNGFGADCDFVADFGSANIFDATSARSTGSPAV-- 272
            .|    .|.:..:|||....||....|:..:.|   |.|         :|..||..|....:.  
Zfish   263 KA----AGSAQASSAGGAVAGATGTGSAAPAQG---DLD---------LFSETSGNSKAEDSAKK 311

  Fly   273 -----SSVSSVGSSNGYAKVQPIRAAHL---QQQQQLQQQLHQQQLLNGNGHQGTENFADFDHAP 329
                 |.:|..|||.  ...||.:|..:   ..|.|...|           .||  ||..|   |
Zfish   312 PLSKDSILSLYGSST--VPQQPAQATAMFMGPSQMQFPAQ-----------PQG--NFQAF---P 358

  Fly   330 IYNAVAPPT 338
            ......|||
Zfish   359 GMGGAMPPT 367

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
drongoNP_001162848.1 ArfGap 15..126 CDD:279720 36/133 (27%)
smap1XP_021336343.1 ArfGap 18..132 CDD:307528 36/119 (30%)
Med15 <329..>466 CDD:312941 15/55 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5347
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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