DRSC/TRiP Functional Genomics Resources

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Protein Alignment drongo and Arap1

DIOPT Version :9

Sequence 1:NP_001162848.1 Gene:drongo / 33263 FlyBaseID:FBgn0020304 Length:673 Species:Drosophila melanogaster
Sequence 2:XP_006508249.1 Gene:Arap1 / 69710 MGIID:1916960 Length:1452 Species:Mus musculus


Alignment Length:343 Identity:61/343 - (17%)
Similarity:103/343 - (30%) Gaps:140/343 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 QDDKYLLALRELVASGTGS------------NRQCFDCGQKGPTYVNMTIGSFVCTRCSGVLRGL 60
            :.:::|.|::..:|....:            ||.|.|||...|.:.::.:...:|.||:|..|||
Mouse   518 EKEQWLEAMQGAIAEALSTSEVAERIWAAAPNRFCADCGAAQPDWASINLCVVICKRCAGEHRGL 582

  Fly    61 -TPPHRVKSISMATFTQDEIDFLRSHGNELCAKTWLGLWDPKRAVHQQEQRELMMDKYERKRYYL 124
             ....:|:|:.|                             .|.|..:...:|.:          
Mouse   583 GAGVSKVRSLKM-----------------------------DRKVWTEALIQLFL---------- 608

  Fly   125 EPASPLKSLANAVNLKSSAPATNHTQNGHQNGYASIHLTP-PAAQRTSANGLQKVANSSSNSSGK 188
                                   |..||..|.:.:.::.| .|.:.:|:.|.::....:....||
Mouse   609 -----------------------HLGNGPGNHFWAANVPPSEALEPSSSPGARRYHLEAKYREGK 650

  Fly   189 TSSSISRPHYNHQNNSQNNNHDAFGLGGGLSSLNSAGSTSTGALSDTSSCASNGFGADCDFVADF 253
                            ....|..||....|.....|..|:|. |::|.:....|.|..|      
Mouse   651 ----------------YRRYHPLFGNQEELDKALCAAVTTTD-LAETQALLGCGAGVSC------ 692

  Fly   254 GSANIFDATSARSTGSPAVSSVSSVGSSNGYAKVQPIRAAHLQQQQQLQQQLHQQQLLNGNGHQG 318
                        .:|.||..:              |:..|     :|..|.|..:.|.|   :|.
Mouse   693 ------------FSGDPAAPT--------------PLALA-----EQAGQTLQMEFLRN---NQS 723

  Fly   319 TENFADFDHAPIYNAVAP 336
            ||       .|..::|.|
Mouse   724 TE-------VPRLDSVKP 734

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
drongoNP_001162848.1 ArfGap 15..126 CDD:279720 22/123 (18%)
Arap1XP_006508249.1 SAM_Arap1,2,3 6..68 CDD:188889
PH1_ARAP 331..422 CDD:270073
PH2_ARAP 438..527 CDD:270074 2/8 (25%)
ArfGap_ARAP 537..652 CDD:350066 30/192 (16%)
PH3_ARAP 745..851 CDD:270076
PH-like 864..954 CDD:388408
RhoGAP_ARAP 959..1137 CDD:239850
RA_ARAP1 1173..1265 CDD:340746
PH5_ARAP 1265..1404 CDD:270079
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5347
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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