DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment drongo and 9030624G23Rik

DIOPT Version :9

Sequence 1:NP_001162848.1 Gene:drongo / 33263 FlyBaseID:FBgn0020304 Length:673 Species:Drosophila melanogaster
Sequence 2:NP_001369748.1 Gene:9030624G23Rik / 66808 MGIID:1914058 Length:591 Species:Mus musculus


Alignment Length:52 Identity:12/52 - (23%)
Similarity:19/52 - (36%) Gaps:21/52 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 SNRQC----------FDCGQKGPTYVNMT---------IGS--FVCTRCSGV 56
            ||.||          ::|.|.|..:..::         ||.  :.|.:|..|
Mouse   493 SNLQCHKRTHTGEKPYECNQCGKAFAQLSNLQCHKRTRIGEKPYECNQCGKV 544

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
drongoNP_001162848.1 ArfGap 15..126 CDD:279720 12/52 (23%)
9030624G23RikNP_001369748.1 KRAB 45..85 CDD:396083
C2H2 Zn finger 118..138 CDD:275368
C2H2 Zn finger 147..166 CDD:275368
zf-H2C2_2 158..182 CDD:404364
C2H2 Zn finger 174..194 CDD:275368
COG5048 198..571 CDD:227381 12/52 (23%)
C2H2 Zn finger 202..222 CDD:275368
C2H2 Zn finger 230..250 CDD:275368
C2H2 Zn finger 258..278 CDD:275368
C2H2 Zn finger 286..306 CDD:275368
C2H2 Zn finger 314..334 CDD:275368
C2H2 Zn finger 342..362 CDD:275368
C2H2 Zn finger 370..390 CDD:275368
C2H2 Zn finger 398..418 CDD:275368
C2H2 Zn finger 426..446 CDD:275368
C2H2 Zn finger 454..474 CDD:275368
C2H2 Zn finger 482..502 CDD:275368 4/8 (50%)
C2H2 Zn finger 510..529 CDD:275368 3/18 (17%)
C2H2 Zn finger 538..558 CDD:275368 3/7 (43%)
C2H2 Zn finger 566..586 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5347
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

Return to query results.
Submit another query.