DRSC/TRiP Functional Genomics Resources

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Protein Alignment drongo and Arfgap3

DIOPT Version :9

Sequence 1:NP_001162848.1 Gene:drongo / 33263 FlyBaseID:FBgn0020304 Length:673 Species:Drosophila melanogaster
Sequence 2:NP_001344685.1 Gene:Arfgap3 / 66251 MGIID:1913501 Length:525 Species:Mus musculus


Alignment Length:608 Identity:119/608 - (19%)
Similarity:204/608 - (33%) Gaps:183/608 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 KQDDKYLLALRELVASGTGSNRQCFDCGQKGPTYVNMTIGSFVCTRCSGVLRGLTPPHRVKSISM 71
            |||   :||:.:.:.| ..:|:.|||||.|.|::.:::.|.|:|..|||       .||...:.:
Mouse     6 KQD---ILAIFKRLRS-VPTNKVCFDCGAKNPSWASISYGVFLCIDCSG-------SHRSLGVHL 59

  Fly    72 ATFTQDEID---------------------FLRSHGNELCAKTWLGLWDPKRAVHQQEQRELMMD 115
            :.....|:|                     |...||   ||.      ....|.:.....:|..:
Mouse    60 SFIRSTELDSNWSWFQLRCMQVGGNSNASSFFHQHG---CAT------KDTNAKYNSRAAQLYRE 115

  Fly   116 KYERKRYYLEPASPLKSLANAVNLKSSAPATNHTQNGHQNGYASIHLTPPAAQR--------TSA 172
            |             :|:||.....:       |..:...:..|:..::||..:.        ...
Mouse   116 K-------------IKTLATQATRR-------HGTDLWLDSCAAPPVSPPPKEEDFFASHASLEV 160

  Fly   173 NGLQKVANSSSNSSGKTSSSISRPHYNHQNNSQNNNHDAFGLGGGLSSLNSAGSTSTGALSD--- 234
            :|..: |::...|:..|...:......|:...        |.|..:..||:.|..:...:|.   
Mouse   161 SGAMQ-ASAQPESASSTPWGLETTPEKHEGGP--------GQGPSVEGLNTPGKAAPAEVSSIIK 216

  Fly   235 -TSSCASNGFGA-----------DCDFVADFGSANIFDATSAR---STGSPAVSSVSSVGSSNGY 284
             ..:.|..|.||           :..|......|...|....:   :.|:|...|:         
Mouse   217 KKPNQAKKGLGAKKGSLGAQKLTNTSFTEIEKQAQAVDKRKEQEDLARGAPKEESI--------- 272

  Fly   285 AKVQPIRAAH------LQQQQQL----QQQLHQQQLLNGNG-------HQGTENFADFD-HAPIY 331
              |..:|.|:      .::.::|    |:::..::|..|.|       |..|.:....: .:|  
Mouse   273 --VSSLRLAYKDLEISRKKDERLNLSGQKKVEAERLGMGFGSCRSGISHSVTSDMQTIEQESP-- 333

  Fly   332 NAVAPP--------------TFNDWISDWSRRGFHDP-------FDDCDDSPPGA-----RPPAP 370
             .:|.|              :.:.|....|.|.|.||       |...||   ||     :..:.
Mouse   334 -TLAKPRRKYQEDPEDSYFSSSSKWSEQSSSRYFDDPMELRSSSFSSWDD---GADSYWKKDSSR 394

  Fly   371 APAPAQVPAVSSPLPTVREEPELAWNFWEDEMRIEAQEKESQTKQPELGYSFSISTTTPLSPSNP 435
            .|.||.....||..|:.|.:||.......|    |||:|....|.......|.|...|       
Mouse   395 DPEPAMRSTGSSDRPSARRKPEYEPIGSTD----EAQKKFGNVKAISSDMYFGIQAQT------- 448

  Fly   436 FLPYLVSEEQHRNHPEKPSFSYSLFSS-ISNSSQEDQADDHEMNVLNANFHDFFTWSAPLQNGHT 499
                   :.:.|...|:.|.|.|:.|: :.:..::..|.::.::.:..|..|.    |..:.|..
Mouse   449 -------DFETRARLERLSTSSSISSADLFDEQRKQTAGNYNLSNVLPNAPDM----AQFKQGVR 502

  Fly   500 TSPPK---GGNAAMAPSEDRYAA 519
            :...|   ..|..|...:|||.:
Mouse   503 SVAGKLSVFANGVMTSIQDRYGS 525

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
drongoNP_001162848.1 ArfGap 15..126 CDD:279720 28/131 (21%)
Arfgap3NP_001344685.1 ArfGap 13..116 CDD:214518 26/119 (22%)
CDC27 <134..>292 CDD:312868 27/177 (15%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 162..206 10/52 (19%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 249..271 4/21 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5347
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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