DRSC/TRiP Functional Genomics Resources

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Protein Alignment drongo and Agap2

DIOPT Version :10

Sequence 1:NP_001162848.1 Gene:drongo / 33263 FlyBaseID:FBgn0020304 Length:673 Species:Drosophila melanogaster
Sequence 2:NP_075415.2 Gene:Agap2 / 65218 RGDID:628844 Length:1186 Species:Rattus norvegicus


Alignment Length:268 Identity:64/268 - (23%)
Similarity:112/268 - (41%) Gaps:34/268 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 VRKKQDDKYLLALRELVASGTGSNRQCFDCGQKGPTYVNMTIGSFVCTRCSGVLRGL-TPPHRVK 67
            |:.:.|.:......:.:.:..| |..|.|||...||:.::.:|:.:|..|||:.|.| |...||:
  Rat   915 VKLRTDSQSEAVAIQAIRNAKG-NSTCVDCGAPNPTWASLNLGALICIECSGIHRNLGTHLSRVR 978

  Fly    68 SISMATFTQDEIDFLRSHGNELCAKTW----LGLWDPKRAVHQQEQRELMMDKYERKRYYLEP-- 126
            |:.:..:.::....|.:.||:...:.|    .|...|.|...::|:...:..||| :..:|.|  
  Rat   979 SLDLDDWPRELTLVLTAIGNDTANRVWESDTRGRAKPTRDSSREERESWIRAKYE-QLLFLAPLG 1042

  Fly   127 --ASPL-KSLANAVNLKSSAPA---TNHTQNGHQNG-------YASIHLTPPAAQRTSANGLQKV 178
              ..|| :.|..||..:..|..   ..|.::|..:.       .:.:||   ||:.......|.:
  Rat  1043 TTEEPLGRQLWAAVEAQDVAAVLLLLAHARHGPLDTSVEDPQLRSPLHL---AAELAHVVITQLL 1104

  Fly   179 ANSSSNSSGKTSSSISRPHYNHQNNSQ-----NNNHDAFGLGGGLSSLNSAGS----TSTGALSD 234
            ....::.:.:.:...:...|..|..||     ...|...|.||..::..||.:    |:|.:...
  Rat  1105 LWYGADVAARDAQGRTALFYARQAGSQLCADILLQHGCPGEGGSTATTPSAATTPSITATPSPRR 1169

  Fly   235 TSSCASNG 242
            .||.||.|
  Rat  1170 RSSAASLG 1177

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
drongoNP_001162848.1 ArfGap_AGFG 15..123 CDD:350067 30/112 (27%)
Agap2NP_075415.2 Interaction with EPB41L1. /evidence=ECO:0000269|PubMed:11136977 1..23
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 24..371
PRK07764 <37..174 CDD:236090
Interactions with HOMER1 and NF2 180..225
Interaction with PLCG1. /evidence=ECO:0000269|PubMed:11823862 262..384
G domain. /evidence=ECO:0000250 399..566
Centaurin_gamma 401..560 CDD:133303
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 576..613
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 628..666
PH_AGAP 668..908 CDD:241281
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 759..784
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 800..844
ArfGap_AGAP 926..1033 CDD:350065 28/107 (26%)
ANKYR <1082..>1141 CDD:440430 9/61 (15%)
ANK repeat 1084..1115 CDD:293786 5/33 (15%)
ANK 1 1084..1113 5/31 (16%)
ANK 2 1117..1146 6/28 (21%)
ANK repeat 1117..1142 CDD:293786 5/24 (21%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1145..1174 8/28 (29%)
Blue background indicates that the domain is not in the aligned region.

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