DRSC/TRiP Functional Genomics Resources

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Protein Alignment drongo and arfgap2

DIOPT Version :9

Sequence 1:NP_001162848.1 Gene:drongo / 33263 FlyBaseID:FBgn0020304 Length:673 Species:Drosophila melanogaster
Sequence 2:XP_005159305.1 Gene:arfgap2 / 641490 ZFINID:ZDB-GENE-051120-177 Length:551 Species:Danio rerio


Alignment Length:721 Identity:130/721 - (18%)
Similarity:218/721 - (30%) Gaps:277/721 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 SNRQCFDCGQKGPTYVNMTIGSFVCTRCSGVLRGLTPPHRVKSISMATFTQDEID---------- 80
            :|:.||||..|.|::.:::.|.|:|..|||:       ||...:.::.....|:|          
Zfish    22 TNKACFDCAAKNPSWASISYGVFLCIDCSGI-------HRSLGVHLSFIRSTELDSNWNWFQLRC 79

  Fly    81 -----------FLRSHG---NELCAKTWLGLWDPKRAVHQQEQRELMMDKYERKRYYLEPASPLK 131
                       |.|.||   |:..||              ...|...|  |..|         ::
Zfish    80 MQVGGNANAMGFFRQHGCTTNDTNAK--------------YNSRAAQM--YREK---------IR 119

  Fly   132 SLANAVNLK--------SSAPATNHTQNGHQNGYASIHLTPPAAQRTSANGLQKVANSSSNSSGK 188
            .||||...|        ||:.|........:..:...| |.||                      
Zfish   120 QLANAALSKYGTDLWIDSSSCAQPSPVEKRETDFFDEH-TQPA---------------------- 161

  Fly   189 TSSSISRPHYNHQNNSQNNNHDAFGLGGGLSSLNSAGSTSTGALSDTSSCASNGFGADCDFVADF 253
            .|..::.|....||.::|.|..       |:..|...|.:.....:.        |...:.::..
Zfish   162 ISWDMASPSLTDQNGAENVNPQ-------LAQSNPKNSETPNTQPEE--------GPSIEGLSTS 211

  Fly   254 GSANIFDATSARSTG----SP------------AVSSVSSVGSSNGYA--KVQPIRAAHLQQQQQ 300
            ..|.|.|  |.|.|.    ||            .|::...:|:..|..  ||.....:.:::|.|
Zfish   212 PKATIED--SMRLTSEEPQSPKDVKPSIIGKKKPVAAKKGLGAKKGLGAQKVSSKSFSEVEKQAQ 274

  Fly   301 LQQQLHQQQLLNGNGHQGTENFADFDHAPIYNAVAPPTFNDWISDWSRRGFHDPFDDCDDSPPGA 365
            :.:::.::|                                                        
Zfish   275 VAEKMREEQ-------------------------------------------------------- 283

  Fly   366 RPPAPAPAPAQVPAVSSPLPTVR---EEPELAWNFWEDEMR-IEAQEKESQTKQPELGYSFS--- 423
                  .|.|:..|..|.:.::|   :|.|:.....|.:|: :|.::||...:   ||..|.   
Zfish   284 ------AAEAKKQADESIVASMRLAYKELEIDRKMEEKKMQNLEGKKKEQAER---LGMGFGNRS 339

  Fly   424 ------------ISTTTPLSPSNPFLPYLVSEEQHRNHPEKPSFS-----YSLFSSISNSSQEDQ 471
                        |...||:...:       |.....:..|:|.|:     |......|..|...:
Zfish   340 AVSHSVMAEMQVIEQETPVGVKS-------SSRSKLDMFEEPGFASGPPKYKDNPFTSGDSFGSR 397

  Fly   472 ADDHEMNVLNANFHDFFTWSAPLQNGHTTSPPKGGNAAMAPSEDRYAALKDLDEQLRELKASESA 536
            .|       |.....|.:|:...:.      ||       .||...::::.:.|:|    .|...
Zfish   398 WD-------NDGGSSFSSWALEKEE------PK-------DSEVTISSIQPIGERL----PSRRK 438

  Fly   537 TETPTPTSGNVQATDAFGGALNNNPNPFKGQQQQQLSSHVVNPFQQQQQQQHQQNLYGQLTLIPN 601
            .|...|.|.:.:|...|..|...:.:.|.|::.        ||  :.:.:...:.:.|. |.|.:
Zfish   439 PEVSVPVSESSEARQKFANAKAISSDMFFGRES--------NP--EYEAKTRLEGMSGS-TSISS 492

  Fly   602 A--YGSSSQQQMGHHLLQQQQQQQQSFFNFNNNGFAISQGLPNGCGFGSMQPA--PVMANNPFAA 662
            |  :|..|.:..|                  :.||  ...||:|......:..  .|.......|
Zfish   493 ADLFGDGSVRPSG------------------STGF--DSVLPSGPDIAQFKQGVKTVAGKMAVLA 537

  Fly   663 SGAMNT 668
            :|.|||
Zfish   538 NGVMNT 543

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
drongoNP_001162848.1 ArfGap 15..126 CDD:279720 28/123 (23%)
arfgap2XP_005159305.1 PLN03114 1..498 CDD:178661 116/654 (18%)
ArfGap 13..117 CDD:279720 27/117 (23%)
TMF_DNA_bd 270..331 CDD:289127 15/125 (12%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5347
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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