DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment drongo and Acap2

DIOPT Version :9

Sequence 1:NP_001162848.1 Gene:drongo / 33263 FlyBaseID:FBgn0020304 Length:673 Species:Drosophila melanogaster
Sequence 2:XP_017453554.1 Gene:Acap2 / 619382 RGDID:1562939 Length:816 Species:Rattus norvegicus


Alignment Length:348 Identity:69/348 - (19%)
Similarity:135/348 - (38%) Gaps:99/348 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 NRQCFDCGQKGPTYVNMTIGSFVCTRCSGVLRGLTPPH--RVKSISMATFTQDEIDFLRSHGNEL 89
            |..|.|||...|.:.::.:|..:|..|||:.|.| ..|  :|:|:::.|:..:.:..:...||::
  Rat   422 NTSCCDCGLADPRWASINLGITLCIECSGIHRSL-GVHFSKVRSLTLDTWEPELLKLMCELGNDV 485

  Fly    90 CAKTW------LGLWDPKRAVHQQEQRELMMDKYERKRY---YLEPASPLKSLANAVNLKSSAPA 145
            ..:.:      :|:..|:.. .:||:...:..||..:::   |....||.:.....::.......
  Rat   486 INRVYEAKLEKMGVKKPQPG-QRQEKEAYIRAKYVERKFVDKYSTLLSPSEQEKRIISKSCEDQR 549

  Fly   146 TNHTQNGHQNGYASIHLTPPAAQ--------------------------------RTSANGLQKV 178
            .:||:       .|:| ||.||.                                :::.:|:|:.
  Rat   550 LSHTR-------VSVH-TPVAAVNSDEARRESLFCPDELDSLFSYFDTSSKLRSIKSNDSGIQQC 606

  Fly   179 ANSSSNS--SGKTSSSISRPHYNHQNNS--QNNNHDAFGLGGGLSSLNSAGSTSTGALSDTSSCA 239
            ::....|  |..:::|:..|....|.:|  .::.|    |..||....::...:...:::..:  
  Rat   607 SDDGRESLPSTVSANSLYEPEGERQESSVFLDSKH----LNPGLQLYRASYEKNLPKMAEALA-- 665

  Fly   240 SNGFGADCDFVADFGSANIFDATSARSTGSPAVSSVSSVGSS---------NGYAKVQPIRAAHL 295
               .|||.::           |.|..:..:|.:.:|  :|.|         || |.|.       
  Rat   666 ---HGADVNW-----------ANSDENQATPLIQAV--LGGSLVTCEFLLQNG-ANVN------- 706

  Fly   296 QQQQQLQQQLHQQQLLNGNGHQG 318
            |:..|.:..||...:|   ||.|
  Rat   707 QRDVQGRGPLHHATVL---GHTG 726

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
drongoNP_001162848.1 ArfGap 15..126 CDD:279720 26/109 (24%)
Acap2XP_017453554.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5347
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

Return to query results.
Submit another query.