DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment drongo and smap2

DIOPT Version :9

Sequence 1:NP_001162848.1 Gene:drongo / 33263 FlyBaseID:FBgn0020304 Length:673 Species:Drosophila melanogaster
Sequence 2:NP_001038260.1 Gene:smap2 / 556132 ZFINID:ZDB-GENE-060503-374 Length:418 Species:Danio rerio


Alignment Length:428 Identity:92/428 - (21%)
Similarity:154/428 - (35%) Gaps:105/428 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 KQDDKYLLALRELVASGTGSNRQCFDCGQKGPTYVNMTIGSFVCTRCSGVLRGL-TPPHRVKSIS 70
            |..|:|...|..|:.  ...|:.|.||..|||.:.:..:|.|:|.||:|:.|.| ....||||::
Zfish     7 KDIDRYQAVLTSLLT--LEENKFCADCYAKGPRWASWNLGIFICIRCAGIHRNLGVHISRVKSVN 69

  Fly    71 MATFTQDEIDFLRSHGNELCAKTWLGLWDP--KRAVHQQEQRELMMDKYERKRYY---------- 123
            :..:||::|..::..||....:.:......  :|....|.....:.|||::|:|.          
Zfish    70 LDQWTQEQIQSVQEMGNAKARRLYEAFLPECFQRPETDQAAEIFIRDKYDKKKYMDKCIDIQSFR 134

  Fly   124 -----------------------------LEPASPLKSLANAVNLKSSAPATNHTQNGHQNGYAS 159
                                         ..|....:|:.:.:.|.:.||....|     ||..|
Zfish   135 KEKSETVTKEAPVVFEKMKLKKDESQQFKSTPKKQSQSVNDLLGLDALAPQPPVT-----NGKPS 194

  Fly   160 IHLTP--------PAAQRTSANGLQKVANSSSNSSGKTSSSISR-------PHYNHQNNSQNNNH 209
            ..::|        |||. :::|..:...:|.|..:|:.::|:..       |....:::.:..:.
Zfish   195 AEISPALDLFSSLPAAV-SNSNSARSTPSSGSMPTGRVAASVPENLSLFLDPPTKSEDSGKKLSK 258

  Fly   210 DAFGLGGGLSSLNSA--------------GSTSTGALSDTSSCASNGFGADCDFVADF------- 253
            |:.     ||..:|.              |:|..|.:...........||....:...       
Zfish   259 DSI-----LSLYSSTAPQTNMAAHAGMYMGATQMGYVPAAGYGQYQALGAQQGMMGPMMAPHMNI 318

  Fly   254 -GSANIFDATSARSTGSPAVSSVSS--VGSSNG----YAKVQPIRAAHLQQQQQLQQQLHQQ-QL 310
             |.|.:...|.| :...|.::.|..  :|..||    .|.| |.:|...||.||||..:.|. |.
Zfish   319 VGQAGVMPQTGA-AAAPPYMAGVQGGVMGMQNGMMGNMAAV-PQQAYGAQQAQQLQWNISQMTQH 381

  Fly   311 LNGNGHQGTENFADFDHAPIYNAVAPPTFNDWISD--W 346
            :.|....|..|...:..:  ....|.|..|..:..  |
Zfish   382 MAGMNFYGANNVMGYGQS--MGGTAAPGSNQMLGSHVW 417

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
drongoNP_001162848.1 ArfGap 15..126 CDD:279720 33/152 (22%)
smap2NP_001038260.1 COG5347 13..>275 CDD:227651 56/274 (20%)
ArfGap 13..115 CDD:279720 28/103 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5347
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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