DRSC/TRiP Functional Genomics Resources

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Protein Alignment drongo and Agfg1

DIOPT Version :9

Sequence 1:NP_001162848.1 Gene:drongo / 33263 FlyBaseID:FBgn0020304 Length:673 Species:Drosophila melanogaster
Sequence 2:NP_001129068.1 Gene:Agfg1 / 363266 RGDID:1560041 Length:561 Species:Rattus norvegicus


Alignment Length:745 Identity:191/745 - (25%)
Similarity:276/745 - (37%) Gaps:278/745 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 AVVRKKQDDKYLLALRELVASGTGSNRQCFDCGQKGPTYVNMTIGSFVCTRCSGVLRGLTPPHRV 66
            |..::||::|:|..||::  :|...||:||||.|:||||||||:||||||.|||.||||.|||||
  Rat     3 ASAKRKQEEKHLKMLRDM--TGLPHNRKCFDCDQRGPTYVNMTVGSFVCTSCSGSLRGLNPPHRV 65

  Fly    67 KSISMATFTQDEIDFLRSHGNELCAKTWLGLWDPKRAV-----HQQEQRELMMDKYERKRYYLEP 126
            |||||.||||.||:||:.||||:|.:.||||:|.:.:.     ..|:.:|.:.:|||:||:|:.|
  Rat    66 KSISMTTFTQQEIEFLQKHGNEVCKQIWLGLFDDRSSAIPDFRDPQKVKEFLQEKYEKKRWYVPP 130

  Fly   127 --------------------------ASPLKSLANAVNLKSSAPATNHTQNGHQNGYASIHLTP- 164
                                      ..|||||     |..||||. |...|          || 
  Rat   131 EQAKVVASVHASISGSSASSTSSTPEVKPLKSL-----LGESAPAL-HLNKG----------TPT 179

  Fly   165 --PAAQRTSANGLQK------------VANSSSNSSGKTSSSISRPHYNH---QN--NSQNNNHD 210
              |...|:.....:|            :..:.:..|..|::..:..|:|.   ||  |::..|.|
  Rat   180 QSPVVGRSQGQQQEKKQFDLLSDLGSDIFAAPAPQSTATANFANFAHFNSHAAQNSANAEFANFD 244

  Fly   211 AFGLGGGLSSLNSAGSTSTGALSDTSSCASNGFGADCDFVADFGSANIFDATSARSTGSPAVSSV 275
            |||        .|:||::.|           ||                 .|::.|...|..:. 
  Rat   245 AFG--------QSSGSSNFG-----------GF-----------------PTASHSPFQPQTTG- 272

  Fly   276 SSVGSSNGYAKVQPIRAAHLQQQQQLQQQLHQQQLLNGNGHQGTENFADFDHAPIYNAVAPPTFN 340
            .|.||.|.                                     |||.||:.|..::....:|:
  Rat   273 GSAGSVNA-------------------------------------NFAHFDNFPKSSSADFGSFS 300

  Fly   341 DWISDWSRRGFHDPFDDCDDSPPGARPPAPAPAPAQVPAVSSPLPTVREEPELAWNFWEDEMRIE 405
                                                                             
  Rat   301 ----------------------------------------------------------------- 300

  Fly   406 AQEKESQTKQPELGYSFSISTTTPLSPSNPFLPYLVSEEQHRNHPEKPSFSYSLFSSISNSSQED 470
                .||:.|       :.||.:.:|.:...|              :.:..|:..:::.|.....
  Rat   301 ----TSQSHQ-------TASTVSKVSTNKAGL--------------QTADKYAALANLDNIFSAG 340

  Fly   471 QADDHEMNVLNANFHDFFTWSAPLQNGHTTSPPKGGNAAMAPSEDRYAALKDLDEQLRELKASES 535
            |..|.     .:.|..  |..||:  |...|.|...:|    |.|:||||.:||........|.:
  Rat   341 QGGDQ-----GSGFGT--TGKAPV--GSVVSVPSHSSA----SSDKYAALAELDSVFSSAATSNN 392

  Fly   536 ATETPTPTSGNVQATDAFGGALNNNP--------------NPFKGQQQQQLSSHVVNPFQQQQQQ 586
            |..:.:..|.:|..|...|.:....|              |||........:|. .||||...:.
  Rat   393 AYTSTSNASSSVFGTVPVGASPQTQPASSGPAPFGATPSTNPFVAATGPSAASS-TNPFQTNARG 456

  Fly   587 QHQQNLYGQLTL-IPNAYGSSSQQQMGHHL---LQQQQQQQQSFFNFNNNGFAISQGLPNGCGFG 647
            ..... :|..:: :|..:|:.:|..:....   .||.....|:.|....   |.|| .|||.||.
  Rat   457 ATAAT-FGTASMSMPAGFGTPAQYSLPTSFSGSFQQPPFPAQAAFPQQT---AFSQ-QPNGAGFA 516

  Fly   648 SM-QPAPVMANNPF---AASGAMNTNNPFL 673
            :. |..||:  .||   ||:|.  ::|||:
  Rat   517 TFGQTKPVV--TPFGQVAAAGV--SSNPFM 542

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
drongoNP_001162848.1 ArfGap 15..126 CDD:279720 67/115 (58%)
Agfg1NP_001129068.1 COG5347 8..309 CDD:227651 124/468 (26%)
ArfGap 14..135 CDD:214518 69/122 (57%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 171..193 6/32 (19%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 409..451 8/42 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 144 1.000 Domainoid score I4484
eggNOG 1 0.900 - - E1_COG5347
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 171 1.000 Inparanoid score I4018
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0002634
OrthoInspector 1 1.000 - - otm45867
orthoMCL 1 0.900 - - OOG6_104959
Panther 1 1.100 - - LDO PTHR46134
Phylome 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X3388
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
98.910

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