DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment drongo and Git

DIOPT Version :9

Sequence 1:NP_001162848.1 Gene:drongo / 33263 FlyBaseID:FBgn0020304 Length:673 Species:Drosophila melanogaster
Sequence 2:NP_610599.3 Gene:Git / 36122 FlyBaseID:FBgn0033539 Length:731 Species:Drosophila melanogaster


Alignment Length:736 Identity:141/736 - (19%)
Similarity:229/736 - (31%) Gaps:267/736 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 CFDCGQKGPTYVNMTIGSFVCTRCSGVLRGLTPPH--RVKSISMATFTQDEIDF---LRSHGNEL 89
            |.|||...|::.::..|..:|..|..|.|.| ..|  .|||:....:....::|   |.:||.. 
  Fly    49 CGDCGAGDPSWASINRGILLCADCCSVHRSL-GRHISIVKSLRQGNWEPSVLNFVNSLNAHGAN- 111

  Fly    90 CAKTWLGLWD-----------------------PKRAVHQQEQRELMMDKYERKRYYLEPASPLK 131
                  .:|:                       ||.|:|                       |.|
  Fly   112 ------SVWEHHLLDGSTNSTGGKHVPRWRKPTPKDALH-----------------------PTK 147

  Fly   132 S---LANAVNLK-SSAPATNHTQNGHQNGYASIHLTPPAAQRTSANGLQKVANSSSNSSGKTS-- 190
            |   .|..|||. ...|:.....:|  ||              ||..|::..:...::|.:||  
  Fly   148 SDFIKAKHVNLTFVLKPSLQDDDDG--NG--------------SAGCLEQELSRQLHASVRTSNL 196

  Fly   191 -SSI------SRPHYNHQNNSQNNNHDA--FG----------LGGGLSSLNSAGSTST------- 229
             :|:      :.|:|.|::......|.|  ||          .|..:::|:..|.|..       
  Fly   197 ETSLRFLVQGADPNYYHEDKLSTPLHMAAKFGQASQIEMLLIYGADVNALDGNGMTPLELARANN 261

  Fly   230 ------------------------GALSDTSS----CASNGFGADC------------------- 247
                                    |...|.:|    ...:..|||.                   
  Fly   262 HNTIAERLLDAMYDVTDRIITFLGGKKPDHASGRHMIIPDANGADISEQLKIARGKLQLVPNKMF 326

  Fly   248 -DFVADFGSANIFDATSARSTGSPAVSSVSSVGSSNG---YAKVQPIRAAHLQQQQQLQQQLHQQ 308
             :.|.|     ::|....|.  ..|:.|.|::.:.:.   :....|..:|...|.:|...:.::.
  Fly   327 EELVMD-----LYDEVDRRE--CEAIWSTSTLNADHATVPFLPANPFLSATRNQGRQKLARFNRA 384

  Fly   309 Q--------LLNGNGHQGTENFADFDHAPIYNAVA----PPTFNDWISDWSRRGFHDPFDDCDDS 361
            :        |::....|...|....| ||:....:    |...|..:.....:|.||| :..||.
  Fly   385 EFTGLLTDVLVDAMRRQNMANLRPMD-APVAGHQSLQSLPYANNSMLLGSFEQGGHDP-NLSDDE 447

  Fly   362 P---PGARPP--APAPAPAQVPAVSSPLPTVREEPELAWNFWEDEMRIEAQEKESQTKQPELGYS 421
            |   |.|...  ||.|..||...|.:|..:.....|:      :.:|.:..:.:|:..|.:    
  Fly   448 PIYDPVASDDDYAPVPPMAQQAIVHTPPRSANSHNEM------ETLRKQLNDYKSEINQLK---- 502

  Fly   422 FSISTTTPLSPSNPFLPYLVSEEQHRNHPEKPSFSYSLFSSISNSSQEDQADDHEMNVLNANFHD 486
               :....||..|..|.                   |.|||.||:|..|:....::::       
  Fly   503 ---NVVQMLSSENTQLK-------------------SKFSSASNNSVYDEPLRIDLSL------- 538

  Fly   487 FFTWSAPLQNGHTTSPPKGG--NAAMAPSEDRYAALKDLDEQLRELKASESATE---TPTPTSGN 546
                |:|.......|.|:||  |.....|.|        ......:|...|..|   .|....||
  Fly   539 ----SSPDTEHEPLSLPEGGTANGESGSSND--------SSNQSTIKRPASMYERRLVPNVAKGN 591

  Fly   547 V---QATDAFGGALNNNPNPFKGQQQQQLSSHV----------VNPFQQQQQQQ---HQQNLYGQ 595
            .   ..|..:  .:..:..|| |::.:..|..|          :.|..:.|:|.   |.:.:...
  Fly   592 TDIRNTTSMY--QMAGDGKPF-GEEVKVRSDLVTRRLKELIRAMQPVPEDQKQSIAPHGELIRSA 653

  Fly   596 LT--------LIPNAYGSSSQ 608
            :|        |.|||...|.:
  Fly   654 VTDLIALYANLPPNASDPSRE 674

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
drongoNP_001162848.1 ArfGap 15..126 CDD:279720 24/123 (20%)
GitNP_610599.3 ArfGap 48..164 CDD:279720 31/145 (21%)
Ank_2 187..279 CDD:289560 15/91 (16%)
ANK <187..270 CDD:238125 15/82 (18%)
ANK repeat 187..213 CDD:293786 6/25 (24%)
ANK repeat 215..247 CDD:293786 5/31 (16%)
ANK repeat 249..279 CDD:293786 2/29 (7%)
GIT_SHD 314..342 CDD:285690 4/34 (12%)
GIT 374..404 CDD:128828 3/29 (10%)
GIT1_C 609..727 CDD:289013 15/67 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45464121
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5347
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.830

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