DRSC/TRiP Functional Genomics Resources

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Protein Alignment drongo and CG8243

DIOPT Version :9

Sequence 1:NP_001162848.1 Gene:drongo / 33263 FlyBaseID:FBgn0020304 Length:673 Species:Drosophila melanogaster
Sequence 2:NP_610424.1 Gene:CG8243 / 35890 FlyBaseID:FBgn0033349 Length:517 Species:Drosophila melanogaster


Alignment Length:678 Identity:134/678 - (19%)
Similarity:220/678 - (32%) Gaps:240/678 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 NRQCFDCGQKGPTYVNMTIGSFVCTRCSGVLRGL-TPPHRVKSISMATFTQDEIDFLRSHGNELC 90
            |:.|.||..|||.:.:..:|.|:|.||:|:.|.| ....||||:::.|:|.:::..|:..||...
  Fly    30 NKYCVDCDAKGPRWASWNLGMFLCIRCAGIHRNLGVHISRVKSVNLDTWTPEQVISLQQMGNSRA 94

  Fly    91 AKTWLGLWDPKRAVHQQE--------QRELMMD-----KYERKRY----YLEPASPLKSLANAVN 138
                       |||::.:        |.:..::     |||.|:|    ::.|:.|....|..::
  Fly    95 -----------RAVYEAQLPDGFRRPQTDTALENFIRAKYEHKKYLAREWVPPSPPKVDWAKEID 148

  Fly   139 --LKSSAPATNHTQNGHQNGYASIHLTPPAAQRTSANGLQKVANSSSNSSGKT--SSSISRPHYN 199
              |:........||.....|.|.:         ...:|.::::.||:::...|  .:.:.:|..|
  Fly   149 EELERQKRKKKSTQAQATLGLAGV---------AGGSGDKRLSGSSASALKNTPLPAPLPKPKPN 204

  Fly   200 HQNNSQNNNHDAFGLGGGLS-------SLNSAGSTSTGALSDTSSCASNGFGADCDFVADFGSAN 257
            ..              ||.|       .|||:|.:|.|. ||....:|    .....||...|.:
  Fly   205 QV--------------GGCSPKTTQRVQLNSSGVSSAGE-SDLLGLSS----PTKPIVATNASQD 250

  Fly   258 IFDA--TSARSTGSPAVSSVSSVGSSNGYAKVQPIRAAHLQQQQQLQQQLHQQQLLNGNGHQGTE 320
            :.:.  ||..|..|.|......:||:...|.:...:...|.|:   :|....|..|...|::..:
  Fly   251 LQNESFTSFLSAESIAGQPDKPIGSNGDAANLMGSKPNSLAQE---EQDFFNQGSLGAGGNEKDQ 312

  Fly   321 N--FADFDHAPIYNAVAPPTFNDWISDWSRRGFHDPFDDCDDSPPGARPPAPAPAPAQVPAVSSP 383
            :  .:......:|.: ||.|.|..::          |.......||.                  
  Fly   313 SGKMSKDSILALYGS-APATHNPQMN----------FGGFTGMAPGG------------------ 348

  Fly   384 LPTVREEPELAWNFWEDEMRIEAQEKESQTKQPELGYSFSISTTTPLSPSNPFLPYLVSEEQHRN 448
                                     ...|.:|.::.:.|   .|.|.|.|....|.:.:.....|
  Fly   349 -------------------------YMHQQQQQQIPHQF---MTPPNSVSMYNSPVMAAPNAFSN 385

  Fly   449 HPEKPSFSYSLFSSISNSSQEDQADDHEMNVLNANFHDFFTWSAPLQNGHTTSPPKGGNAAMAPS 513
                        ::||:::.......|  ....|.|                 |..||:.     
  Fly   386 ------------AAISSATAMSMGGSH--GFTGAQF-----------------PSTGGSP----- 414

  Fly   514 EDRYAALKDLDEQLRELKASESATETPTPTSGNVQATDAFGGALNNNPNPFKGQQQQQLSSHVVN 578
               |||            |.::|......|:.::.:.....||:                     
  Fly   415 ---YAA------------AGQAAATNLMQTNQSILSGMPLFGAV--------------------- 443

  Fly   579 PFQQQQQQQHQQNLYGQLTLIPNAYGSSSQQQMGHHLLQQQQQQQQSFFNFNNNGFAISQGLPNG 643
               .||||||||.                        ||||...|....:.|     :.|.||:|
  Fly   444 ---PQQQQQHQQQ------------------------LQQQHHPQLGGLSMN-----LMQPLPSG 476

  Fly   644 CGFGSMQPAPVMANNPFAASGAMNTNNP 671
            ...|.    |......|||:|...::.|
  Fly   477 LNIGQ----PPQGAGGFAATGPTTSSVP 500

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
drongoNP_001162848.1 ArfGap 15..126 CDD:279720 33/116 (28%)
CG8243NP_610424.1 ArfGap 18..132 CDD:279720 33/112 (29%)
COG5347 20..300 CDD:227651 73/311 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45464134
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5347
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.740

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