DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment drongo and Git2

DIOPT Version :9

Sequence 1:NP_001162848.1 Gene:drongo / 33263 FlyBaseID:FBgn0020304 Length:673 Species:Drosophila melanogaster
Sequence 2:XP_017453834.1 Gene:Git2 / 304546 RGDID:1359708 Length:761 Species:Rattus norvegicus


Alignment Length:742 Identity:125/742 - (16%)
Similarity:214/742 - (28%) Gaps:286/742 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 SNRQCFDCGQKGPTYVNMTIGSFVCTRCSGVLRGL----TPPHRVKSISMATFTQDEIDFLRSHG 86
            ||..|.||....|::.::..|:.:|..|..|.|.|    :....:|...........::.|.|:|
  Rat     7 SNDVCADCSGPDPSWASVNRGTLICDECCSVHRSLGRHISQVRHLKHTPWPPTLLQMVETLYSNG 71

  Fly    87 NELCAKTWLGLWD-----------------PKRAVHQQEQRELMMDKYERKRY------------ 122
            ..       .:|:                 |:..|| ..:.|.:..||:...:            
  Rat    72 AN-------SIWEHSLLDPASVMSGRRKANPQDKVH-PNKAEFIRAKYQMLAFVHRLPCRDDDSV 128

  Fly   123 -------YLEPASPLKSLANAVNLKSSAPATN--HTQNGHQNGYASIHLTPPAAQRTSAN--GLQ 176
                   .|..:....:|...:.|.|.....|  |.:.|.    ..:|:...|.|...|.  .:.
  Rat   129 TAKDLSKQLHSSVRTGNLETCLRLLSLGAQANFFHPEKGS----TPLHVASKAGQILQAELLAVY 189

  Fly   177 KVANSSSNSSGKTSSSISRPHYNHQNNSQN--------NNHDAFGLGG----------------- 216
            .....:.:|||||....:| ...|:..::.        .:..||.|.|                 
  Rat   190 GADPGTHDSSGKTPVDYAR-QGGHRELAERLVEIQYELTDRLAFYLCGRKPDHKNGQHFIIPQMA 253

  Fly   217 ------GLSSLNSAGSTSTGALSDTSSCASNGFGADCDFVADFGSANIFDATSARSTGSP--AVS 273
                  .||.|..|......:||              :.:.:..:.:::|....|.|.:.  |..
  Rat   254 DRRLSLDLSELAKAAKKKLQSLS--------------NHLFEELAMDVYDEVDRRETDAVWLATQ 304

  Fly   274 SVSSVGSSNGYAKVQPIRAAHLQQQQQLQQQL--------------------HQQQ--------- 309
            :.|::.:........|:...:...:.|.:|:|                    .:||         
  Rat   305 NHSTLVTETTVVPFLPVNPEYSSTRNQGRQKLARFNAHEFATLVIDILSDAKRRQQGSPLSRSKD 369

  Fly   310 ----LLNGNGHQGTENFADFDHAPIYNAVAPPTFNDWISDWSRRGFHDPFD-DCDDSPPGARPPA 369
                :|....:|.:....|.|. |.|::||.....|..:..||.......| |..|.|       
  Rat   370 NVELILRTVSNQHSTESQDNDQ-PDYDSVASDEDTDVETRASRTNRQKSLDSDLSDGP------- 426

  Fly   370 PAPAPAQVPAVSSPLPTVREEPELAW----------------NFWEDEMRIEAQEKESQTKQPE- 417
                           .||:|..|:..                |....|:||  .:|:.||.|.| 
  Rat   427 ---------------VTVQEFMEVKHALVASEAKRQQLMKVNNNLSGELRI--MQKKLQTLQSEN 474

  Fly   418 -----------------------LGYSF-----SISTTTPL------SPSNPFLPYLVSEEQHRN 448
                                   :.:|.     |...:.|:      |...|:||.     ...|
  Rat   475 SSLRRQATASACQVQTASDHKDTVSHSSLKRRPSARGSRPMSMYETGSGQKPYLPM-----GEAN 534

  Fly   449 HPEK------------------------PSFSYSLF---------------------SSISNSSQ 468
            |||:                        |||..:|.                     |...|::.
  Rat   535 HPEESRTRLQPFPTHIGRSALVTSSSSLPSFPSTLSWSRDESTRRASRLEKQNSTPESDYDNTAY 599

  Fly   469 EDQADD-------HEMNVLNANFHDFFTW--SAPLQNGHTTSPPKGGNAAMAPSEDRYAALKDLD 524
            :.:.||       .:.::|         |  ..||.:  |..|....:.|:..:||.....:.:.
  Rat   600 DPEPDDTVSGRKGRQRSML---------WQGDGPLPD--TAEPHAVPSPALPSTEDVIRKTEQIT 653

  Fly   525 EQLREL--KASESATETPTPTSGNVQA 549
            :.::||  .|.|:..::..|.|..:.|
  Rat   654 KNIQELLRAAQENKHDSYIPCSERIHA 680

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
drongoNP_001162848.1 ArfGap 15..126 CDD:279720 24/139 (17%)
Git2XP_017453834.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5347
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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