DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment drongo and Agfg2

DIOPT Version :9

Sequence 1:NP_001162848.1 Gene:drongo / 33263 FlyBaseID:FBgn0020304 Length:673 Species:Drosophila melanogaster
Sequence 2:XP_006249202.1 Gene:Agfg2 / 304375 RGDID:1306590 Length:488 Species:Rattus norvegicus


Alignment Length:530 Identity:148/530 - (27%)
Similarity:221/530 - (41%) Gaps:118/530 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 LRELVASGTGSNRQCFDCGQKGPTYVNMTIGSFVCTRCSGVLRGLTPPHRVKSISMATFTQDEID 80
            :|||.......||.||:|.|:|.|||::|:||||||.|||:||||.||||||||||.|||:.|:.
  Rat    33 VRELGGCSQAGNRHCFECAQRGVTYVDITVGSFVCTTCSGLLRGLNPPHRVKSISMTTFTEPEVL 97

  Fly    81 FLRSHGNELCAKTWLGLWDPKRAV-----HQQEQRELMMDKYERKRYYLEP-----ASPLKSLAN 135
            ||:|.|||:|.|.||||:|.:.::     ..|:.:|.:.:|||:||:|:.|     ||..|...:
  Rat    98 FLQSRGNEVCRKIWLGLFDARTSLVPDSRDPQKVKEFLQEKYEKKRWYVPPEQVKGASYSKGSVS 162

  Fly   136 AVNLKSSAPATNHTQNGHQNGYASIHLTPPAAQRTSANGLQKVANSSSNSSGKTSSSISRPHYNH 200
            |..::.|.|...                  ..:....:.:..:::::|.||...|.|.:|.  ..
  Rat   163 ATPVQGSVPEGK------------------PIRTLLGDPVPSLSDAASTSSQSVSQSQART--AQ 207

  Fly   201 QNNSQNNNHDAFGLGGGLSSLNSAGSTSTGALSDTSSCASNGFGADCDFVAD-----FGSANIFD 260
            ..:||..:|            :|....||..|:|        .|.| .|.|.     |.|...|.
  Rat   208 ARSSQPPSH------------SSTKKASTDLLAD--------IGGD-PFAAPQVAPAFASFPGFG 251

  Fly   261 ATSARSTGSPAVSSVSSVGSSNGYAKVQPIRAAHLQQQQQLQQQLHQQQLLNGNGHQGTENFADF 325
            ..:....|.....:.||..||:.:..:.|    .:|...|.|......::|.|:...|:...:.|
  Rat   252 GQNPSHGGFANFDAFSSSPSSSAFGSLPP----SVQTPFQAQPTPAANRMLTGSYSFGSSQMSAF 312

  Fly   326 DHAPIYNAVAPPTFNDWISDWSRRGFHDPFDDCDDSPPGARPPAPAPAPAQVPAVSSPLPTVREE 390
            ..||:..|..|.:..|      ..|..:|     ....|..|.:....|:||||:.|.:|.|...
  Rat   313 GVAPLAAASQPNSLAD------VGGLLEP-----RMAAGGLPGSVFGMPSQVPALQSAVPGVGGS 366

  Fly   391 PELAWNFWEDEMRIEAQEKESQTKQPELGYSFSISTTTPLSP----SNPFLPY---------LVS 442
            ..|.:.                        :|:...|||..|    :|||.|.         :.|
  Rat   367 TGLPFG------------------------AFTNPFTTPAQPQLPSTNPFQPNGIASGPGYGMGS 407

  Fly   443 EEQHRNHPEKPSFSY-SLFSSISNSSQEDQADDHEMNVLNANFHDFFT---WSAPLQN--GHTTS 501
            .:.....|..||.:: |.|.:....:|....:...    .::|.|..|   ...||..  |.:|:
  Rat   408 VQPGLLQPAPPSGAFASTFPAPVFPTQAGLVEQQN----GSSFGDLGTSKLGQRPLSQPAGISTN 468

  Fly   502 PPKGGNAAMA 511
            |...|::|.|
  Rat   469 PFMTGSSAFA 478

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
drongoNP_001162848.1 ArfGap 15..126 CDD:279720 62/114 (54%)
Agfg2XP_006249202.1 ArfGap 40..152 CDD:295313 60/111 (54%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 144 1.000 Domainoid score I4484
eggNOG 1 0.900 - - E1_COG5347
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 171 1.000 Inparanoid score I4018
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0002634
OrthoInspector 1 1.000 - - otm45867
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR46134
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X3388
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
98.960

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