DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment drongo and Git2

DIOPT Version :9

Sequence 1:NP_001162848.1 Gene:drongo / 33263 FlyBaseID:FBgn0020304 Length:673 Species:Drosophila melanogaster
Sequence 2:XP_006530402.1 Gene:Git2 / 26431 MGIID:1347053 Length:761 Species:Mus musculus


Alignment Length:703 Identity:122/703 - (17%)
Similarity:216/703 - (30%) Gaps:212/703 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 SNRQCFDCGQKGPTYVNMTIGSFVCTRCSGVLRGLTPPH--RVKSISMATFTQDEIDFLRSHGNE 88
            |:..|.||....|::.::..|:|:|..|..|.|.| ..|  :|:.:....:....:..:.:..|.
Mouse     7 SSDVCADCNGPDPSWASVNRGTFICDECCSVHRSL-GRHISQVRHLKHTAWPPTLLQMVETLYNN 70

  Fly    89 LCAKTW-LGLWDP------KRAVHQQE-----QRELMMDKYERKRY------------------- 122
            .....| ..|.||      :|..:.|:     :.|.:..||:...:                   
Mouse    71 GANSIWEHSLLDPASIMSGRRKANPQDKVHPNKAEFIRAKYQMLAFVHRLPCREDDSVTAKDLSK 135

  Fly   123 YLEPASPLKSLANAVNLKSSAPATN--HTQNGHQNGYASIHLTPPAAQRTSAN--GLQKVANSSS 183
            .|..:....:|...:.|.|.....|  |.:.|.    ..:|:...|.|...|.  .:......:.
Mouse   136 QLHSSVRTGNLETCLRLLSLGAQANFFHPEKGS----TPLHVASKAGQILQAELLAVYGADPGTQ 196

  Fly   184 NSSGKTSSSISRPHYNHQNNSQNNNHD----------------AFGLGGGLSSLNS--------- 223
            :|||||....:|         |..:|:                ||.|.|......|         
Mouse   197 DSSGKTPVDYAR---------QGGHHELAERLIEIQYELTDRLAFYLCGRKPDHKSGQHFLIPQR 252

  Fly   224 AGSTSTGALSDTSSCASNGFGADCDFVADFGSANIFDATSARSTGSP--AVSSVSSVGSSNGYAK 286
            |....:..||:.:..|.....:..:.:.:..:.:::|....|.|.:.  |..:.|::.:......
Mouse   253 ADRRLSLDLSELAKAAKKKLQSLSNHLFEELAMDVYDEVDRRETDAVWLATQNHSTLVTETTVVP 317

  Fly   287 VQPIRAAHLQQQQQLQQQL--------------------HQQQ-------------LLNGNGHQG 318
            ..|:...:...:.|.:|:|                    .:||             :|.....|.
Mouse   318 FLPVNPEYSSTRNQGRQKLARFNAHEFATLVIDILSDAKRRQQGSPLSRSKDNVELILRTVSTQH 382

  Fly   319 TENFADFDHAPIYNAVAPPTFNDWISDWSRRGFHDPFD-DCDDSPPGARPPAPAPAPAQVPAVSS 382
            :....|.|. |.|::||.....|..:..|:.......| |..|.|...:         :...|.|
Mouse   383 STESQDNDQ-PDYDSVASDEDTDVETRASKANRQKSLDSDLSDGPVTVQ---------EFMEVKS 437

  Fly   383 PL---PTVREEPELAWNFWEDEMRIEAQEKESQTKQPE--------------------------- 417
            .|   ...|::.....|...||:||  .:|:.||.|.|                           
Mouse   438 ALVASEAKRQQLMKVNNNLSDELRI--MQKKLQTLQSENSSLRRQATASACQVQTGSDHKDTASH 500

  Fly   418 --LGYSFSISTTTPL------SPSNPFLPYLVSEEQHRNHPEK---------------------- 452
              |....|...:.|:      |...|:||.     ...:|||:                      
Mouse   501 SSLKRRPSARGSRPMSMYETGSGQKPYLPM-----GEASHPEESRTRLQPFPTHIGRSALVTSSS 560

  Fly   453 --PSFSYSLFSSISNSSQEDQADDHEMNVLNANFHDFFTWSAPLQNGHT---------------- 499
              |||..:|..|...|::.....:.:.:...:::.:......|...|.|                
Mouse   561 SLPSFPSTLSWSRDESARRASRLEKQNSTPESDYDNTACDPEPDDTGSTRKGRQRSMLWQGDGLL 625

  Fly   500 --TSPPKGGNAAMAPS-EDRYAALKDLDEQLREL--KASESATETPTPTSGNV 547
              |:.|....:...|| ||.....:.:.:.::||  .|.|:..::..|.|..:
Mouse   626 PDTAEPHSVPSPTLPSTEDVIRKTEQITKNIQELLRAAQENKHDSYIPCSERI 678

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
drongoNP_001162848.1 ArfGap 15..126 CDD:279720 25/132 (19%)
Git2XP_006530402.1 ArfGap_GIT2 1..111 CDD:350072 22/104 (21%)
Ank_2 137..229 CDD:372319 19/104 (18%)
ANK repeat 137..165 CDD:293786 6/27 (22%)
ANK repeat 167..197 CDD:293786 5/33 (15%)
GIT_SHD 268..296 CDD:369921 3/27 (11%)
GIT_SHD 332..360 CDD:369921 2/27 (7%)
GIT_CC 416..480 CDD:374629 18/74 (24%)
GIT1_C 640..754 CDD:371961 10/39 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5347
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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