DRSC/TRiP Functional Genomics Resources

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Protein Alignment drongo and Agap2

DIOPT Version :9

Sequence 1:NP_001162848.1 Gene:drongo / 33263 FlyBaseID:FBgn0020304 Length:673 Species:Drosophila melanogaster
Sequence 2:XP_006513621.1 Gene:Agap2 / 216439 MGIID:3580016 Length:1342 Species:Mus musculus


Alignment Length:162 Identity:42/162 - (25%)
Similarity:74/162 - (45%) Gaps:15/162 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 VRKKQDDKYLLALRELVASGTGSNRQCFDCGQKGPTYVNMTIGSFVCTRCSGVLRGL-TPPHRVK 67
            |:.:.|.:......:.:.:..| |..|.|||...||:.::.:|:.:|..|||:.|.| |...||:
Mouse   915 VKLRTDSQSEAVAIQAIRNAKG-NSTCVDCGAPNPTWASLNLGALICIECSGIHRNLGTHLSRVR 978

  Fly    68 SISMATFTQDEIDFLRSHGNELCAKTW----LGLWDPKRAVHQQEQRELMMDKYERKRYYLEP-- 126
            |:.:..:.::....|.:.||:...:.|    .|...|.|...::|:...:..||| :..:|.|  
Mouse   979 SLDLDDWPRELTLVLTAIGNDTANRVWESDTRGRAKPTRDSSREERESWIRAKYE-QLLFLAPLG 1042

  Fly   127 --ASPL-KSLANAVNLKSSAPA---TNHTQNG 152
              ..|| :.|..||..:..|..   ..|.::|
Mouse  1043 TTEEPLGRQLWAAVEAQDVAAVLLLLAHARHG 1074

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
drongoNP_001162848.1 ArfGap 15..126 CDD:279720 31/115 (27%)
Agap2XP_006513621.1 PHA03247 <52..320 CDD:223021
Centaurin_gamma 401..560 CDD:133303
PH_AGAP 668..908 CDD:241281
ArfGap_AGAP 926..1033 CDD:350065 28/107 (26%)
SelP_N <1136..1188 CDD:368014
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5347
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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