DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment drongo and Asap2

DIOPT Version :9

Sequence 1:NP_001162848.1 Gene:drongo / 33263 FlyBaseID:FBgn0020304 Length:673 Species:Drosophila melanogaster
Sequence 2:XP_006515110.1 Gene:Asap2 / 211914 MGIID:2685438 Length:1003 Species:Mus musculus


Alignment Length:603 Identity:122/603 - (20%)
Similarity:210/603 - (34%) Gaps:183/603 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 TGSNRQCFDCGQKGPTYVNMTIGSFVCTRCSGVLRGLTPPH-RVKSISMATFTQDEIDFLRSHGN 87
            || |..|.|||...||:::..:|...|..|||:.|.|...: |::|:::......|:...::.||
Mouse   434 TG-NDVCCDCGAPDPTWLSTNLGILTCIECSGIHRELGVHYSRMQSLTLDVLGTSELLLAKNIGN 497

  Fly    88 -------ELCAKTWLGLWDPKRAVHQQE---QRELMMDKYERKRY----YLEPASPLKSLANAVN 138
                   |.|    |...||.:.....:   :::.:..||..:||    :.:.|:.|.||..||.
Mouse   498 AGFNEIMECC----LPSEDPVKPNPGSDMIARKDYITAKYMERRYARKKHADTAAKLHSLCEAVK 558

  Fly   139 -------LKSSAPATNHTQ-----NGHQNGYASIHLTPPAAQRTSANGLQKVANSSSNSSGKTSS 191
                   |::.|...:.|:     |||:....::||...:..|||.:.:..:..:|.|...:|..
Mouse   559 TRDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQNSGNLDKQTGK 623

  Fly   192 SISRPHYNHQNNSQNNNHDAFGLGGGLSSLNSAGSTSTGALSDTSSCAS---NGFGADCDFVADF 253
            ..:..||                               ..|:|.:.|..   .| .|..:...:.
Mouse   624 GSTALHY-------------------------------CCLTDNAECLKLLLRG-KASIEIANES 656

  Fly   254 GSANIFDATSARSTGSPAVSSVSSVGSSNGYAKVQ-PIRAAH--LQQ-----QQQLQQQLHQQQL 310
            |...:..|...:......:.:.:..|..|.:..|: ..|..|  |.:     .::||...::::.
Mouse   657 GETPLDIAKRLKHEHCEELLTQALSGRFNSHVHVEYEWRLLHEDLDESDDDVDEKLQPSPNRRED 721

  Fly   311 LNGNGHQ-GTENFADFDHAPIYNAV--APPTFNDWISDWSRRGF------HDPFDD-CDDSPPGA 365
            ...:.:| |:..|..       |||  |..|.|  ::...:|||      ::.:.. ...|||.:
Mouse   722 RPVSFYQLGSSQFQS-------NAVSLARDTAN--LTKDKQRGFGPSILQNETYGAILSGSPPSS 777

  Fly   366 R--PPAPAPAP------------------------------------AQVPAVSSPLPTVR---- 388
            :  ||:...||                                    :.:|||..|||.:|    
Mouse   778 QSIPPSTTSAPPLPPRNVGKVQTATSANTLWKTNSVGVDGISRQRSSSDLPAVHPPLPPLRVTST 842

  Fly   389 ------EEPELAWNFWEDEMRIEAQEKESQTKQPELGYSFSISTTTPLSPSNPFLPYLVSEEQHR 447
                  ..|.:|    :....:||..:.|::.||    ..|.|...||.|..|          .|
Mouse   843 NPLTTTPPPPVA----KTSGTLEAMNQPSKSSQP----GTSQSKPPPLPPQPP----------SR 889

  Fly   448 NHPEKPSFSYSLFSSISNSSQEDQADDHEMNVLNANFHDFFTWSAPLQNGHTTSPPKGGNAAMAP 512
            ...:||:......:.::|..|....:.                |.||.|.....||       ||
Mouse   890 LPQKKPASGTDKPTPLTNKGQPRGPEA----------------SGPLSNAMALQPP-------AP 931

  Fly   513 SEDRYAALKDLDEQLREL 530
            ...:..|.|...::::.|
Mouse   932 MPRKSQATKSKPKRVKAL 949

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
drongoNP_001162848.1 ArfGap 15..126 CDD:279720 30/116 (26%)
Asap2XP_006515110.1 BAR_ASAP2 34..248 CDD:153326
PH_ASAP 300..406 CDD:270071
ArfGap_ASAP2 422..544 CDD:350074 30/114 (26%)
ANK repeat 553..585 CDD:293786 7/31 (23%)
ANK repeat 589..621 CDD:293786 7/31 (23%)
Ank_2 592..676 CDD:372319 17/115 (15%)
ANK repeat 623..654 CDD:293786 7/62 (11%)
SH3_ASAP2 945..1000 CDD:212899 1/5 (20%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5347
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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