DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment drongo and git-1

DIOPT Version :9

Sequence 1:NP_001162848.1 Gene:drongo / 33263 FlyBaseID:FBgn0020304 Length:673 Species:Drosophila melanogaster
Sequence 2:NP_509761.2 Gene:git-1 / 181253 WormBaseID:WBGene00008805 Length:670 Species:Caenorhabditis elegans


Alignment Length:580 Identity:102/580 - (17%)
Similarity:168/580 - (28%) Gaps:206/580 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 RQCFDCGQKGPTYVNMTIGSFVCTRCSGVLRGLTPP-HRVKSISMATFTQDEIDFLRSHGNELCA 91
            ::|.|||:|...:.::..|:.:|:.|......|.|. ..::.:..:.:.::.|..:.:.......
 Worm    16 KECDDCGKKEVEWASVKKGTVICSECFCFHSYLGPSVSYLRHLRKSAWDEEHIRLVHALNTSNTN 80

  Fly    92 KTW-LGLW------------DPKRAVHQQEQRELMMDKYERKRYYLEPASPLKSLANAVNLKSSA 143
            ..| ..|:            ||.   |.:||  .:.:|||:..:..:.... :.|.|::|.:..|
 Worm    81 MIWESALYEGSTKFQKPMAQDPS---HIKEQ--FVKEKYEKLTFQPKRGKD-EDLENSLNRQLIA 139

  Fly   144 PATNHTQNGHQNGYASIHLTPPAAQRTSANGLQKVANSSSNSSGKTSSSISRPHYNHQNNSQNNN 208
            .|        ::.:|.:.|      |..|.|..  .|.....:|.|:.     |...:..:.|..
 Worm   140 CA--------RSDFAHVTL------RLIALGAD--VNYPDPETGDTAL-----HVAAREGNSNQV 183

  Fly   209 HDAFGLGGGLSSLNSAGSTSTGALSDTSSCASNGFGADCDFVADFGSANIFDATSARSTGSPAVS 273
            ...|..|..:.:.|..|........|.      |.|.....:.:| ...:||..|......    
 Worm   184 ELLFLYGADIMAPNREGMLPYILARDA------GHGQLSHRIYEF-FFYVFDRFSFFMCNR---- 237

  Fly   274 SVSSVGSSNGYAKVQPIRAAHLQQQQQLQQQLHQQQLLNGNGHQGTENFADFDHAPIYNAVAPPT 338
                             :|.|...|.....::.::|.|....          |.....:.:....
 Worm   238 -----------------KADHKNNQDFFIPEVTEKQFLTKTN----------DSRAAISVLPKGQ 275

  Fly   339 FNDWISDWSRRGFHDPFDDCDDSPPGARPPAPAPAPAQVPAVSSPLPTVREEPELAWNF--WEDE 401
            |               ||.|:|:..                     .|||.|.|:.||.  |   
 Worm   276 F---------------FDLCEDAFD---------------------ETVRRENEVNWNMTKW--- 301

  Fly   402 MRIEAQEKESQTKQPELGYSFSISTTTPLSPSNPFLPYLVSEEQHRNHPEKP-------SFSYSL 459
                                    ..|...|:|.|||........||...:.       .|:..|
 Worm   302 ------------------------AKTAKGPTNLFLPPTPQMSAARNQRRQKLAKFTPIQFTILL 342

  Fly   460 FSSISNSSQEDQADDHEMNVLNANFHDFFTWSAPLQNGHTTSPPKGGNAA-------MAPSE--- 514
            ...|.:..:....|:                .||:     :.|||....:       |..||   
 Worm   343 IDLIKDQKRRITGDN----------------PAPV-----SEPPKNMRKSNDTPLRIMKKSEYAD 386

  Fly   515 -DRYAAL--------------KDLDE-------QLRELKASESATET--PTPTSGNVQAT 550
             |..|.:              ..|||       :|.|:|...|:|||  .|.|..|.:.|
 Worm   387 YDEVAGISCSPISGIVPNSQANTLDESSSRVWDELLEMKERLSSTETMVVTLTKQNEELT 446

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
drongoNP_001162848.1 ArfGap 15..126 CDD:279720 21/111 (19%)
git-1NP_509761.2 ArfGap 7..127 CDD:214518 21/116 (18%)
ANK <122..212 CDD:238125 20/117 (17%)
Ank_5 152..207 CDD:290568 11/61 (18%)
ANK repeat 165..197 CDD:293786 6/36 (17%)
GIT 264..294 CDD:128828 9/65 (14%)
GIT 326..356 CDD:128828 3/29 (10%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5347
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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