DRSC/TRiP Functional Genomics Resources

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Protein Alignment drongo and Agfg1

DIOPT Version :9

Sequence 1:NP_001162848.1 Gene:drongo / 33263 FlyBaseID:FBgn0020304 Length:673 Species:Drosophila melanogaster
Sequence 2:XP_006496493.1 Gene:Agfg1 / 15463 MGIID:1333754 Length:577 Species:Mus musculus


Alignment Length:771 Identity:192/771 - (24%)
Similarity:278/771 - (36%) Gaps:295/771 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 AVVRKKQDDKYLLALRELVASGTGSNRQCFDCGQKGPTYVNMTIGSFVCTRCSGVLRGLTPPHRV 66
            |..::||::|:|..||::  :|...||:||||.|:||||||||:||||||.|||.||||.|||||
Mouse     3 ASAKRKQEEKHLKMLRDM--TGLPHNRKCFDCDQRGPTYVNMTVGSFVCTSCSGSLRGLNPPHRV 65

  Fly    67 KSISMATFTQDEIDFLRSHGNELCAKTWLGLWDPKRAV-----HQQEQRELMMDKYERKRYYLEP 126
            |||||.||||.||:||:.||||:|.:.||||:|.:.:.     ..|:.:|.:.:|||:||:|:.|
Mouse    66 KSISMTTFTQQEIEFLQKHGNEVCKQIWLGLFDDRSSAIPDFRDPQKVKEFLQEKYEKKRWYVPP 130

  Fly   127 --------------------------ASPLKSL----ANAVNLK----SSAPATNHTQNGHQ--- 154
                                      ..|||||    |.|::|.    |.:|....:|...|   
Mouse   131 EQAKVVASVHASISGSSASSTSSTPEVKPLKSLLGESAPALHLNKGTPSQSPVVGRSQGQQQEKK 195

  Fly   155 -----NGYASIHLTPPAAQRTSANGLQKVANSSSNSSGKTSSSISRPHYNHQNNSQNNNHDAFGL 214
                 :...|.....||.|.|:.......|:.:|:::..::            |:...|.|||| 
Mouse   196 QFDLLSDLGSDIFAAPAPQSTATANFANFAHFNSHAAQNSA------------NADFANFDAFG- 247

  Fly   215 GGGLSSLNSAGSTSTGALSDTSSCASNGFGADCDFVADFGSANIFDATSARSTGSPAVSSVSSVG 279
                   .|:||::.|           ||                 .|::.|:..|..:. .|.|
Mouse   248 -------QSSGSSNFG-----------GF-----------------PTASHSSFQPQTTG-GSAG 276

  Fly   280 SSNGYAKVQPIRAAHLQQQQQLQQQLHQQQLLNGNGHQGTENFADFDHAPIYNAVAPPTFNDWIS 344
            |.|.                                     |||.||:.|..::....||:    
Mouse   277 SVNA-------------------------------------NFAHFDNFPKSSSADFGTFS---- 300

  Fly   345 DWSRRGFHDPFDDCDDSPPGARPPAPAPAPAQVPAVSSPLPTVREEPELAWNFWEDEMRIEAQEK 409
                                                                             
Mouse   301 ----------------------------------------------------------------- 300

  Fly   410 ESQTKQPELGYSFSISTTTPLSPSNPFLPYLVSEEQHRNHPEKPSFSYSLFSSISNSSQEDQADD 474
            .||:.|       :.||.:.:|.:...|              :.:..|:..:::.|.....|..|
Mouse   301 TSQSHQ-------TASTVSKVSTNKAGL--------------QTADKYAALANLDNIFSAGQGGD 344

  Fly   475 HEMNVLNANFHDFFTWSAPLQNGHTTSPPKGGNAAMAPSEDRYAALKDLDEQLRELKASESATET 539
            .     .:.|..  |..||:  |...|.|...:|    |.|:||||.:||........|.:|...
Mouse   345 Q-----GSGFGT--TGKAPV--GSVVSVPSHSSA----SSDKYAALAELDSVFSSAATSSNAYTP 396

  Fly   540 PTPTSGNVQATDAFGGALNNNP--------------NPFKGQQQQQLSSHVVNPFQ--------- 581
            .:..|.:|..|...|.:....|              |||........:|. .||||         
Mouse   397 TSNASSSVFGTVPVGASAQTQPASSGPAPFGATPSTNPFVAATGPSAASS-TNPFQTNARGATGL 460

  Fly   582 ------QQQQQQHQQNLYGQLTL-IPNAYGSSSQQQMGHHL---LQQQQQQQQSFFNFNNNGFAI 636
                  |.....|....:|..:: :|..:|:.:|..:....   .||.....|:.|....   |.
Mouse   461 SGAMHSQVFPHAHFAATFGTASMSMPAGFGTPAQYSLPTSFSGSFQQPAFPAQAAFPQQT---AF 522

  Fly   637 SQGLPNGCGFGSM-QPAPV-----------MANNPF---AASGAMNT----NNPFL 673
            || .|||.||.:. |..||           :::|||   |.:|.:.|    .||||
Mouse   523 SQ-QPNGAGFATFGQTKPVVTPFGQVAAAGVSSNPFMTGAPTGQLPTGSSSTNPFL 577

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
drongoNP_001162848.1 ArfGap 15..126 CDD:279720 67/115 (58%)
Agfg1XP_006496493.1 COG5347 8..268 CDD:227651 105/309 (34%)
ArfGap_AGFG1 13..128 CDD:350082 67/116 (58%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 144 1.000 Domainoid score I4585
eggNOG 1 0.900 - - E1_COG5347
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 170 1.000 Inparanoid score I4119
Isobase 1 0.950 - 0 Normalized mean entropy S4766
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0002634
OrthoInspector 1 1.000 - - otm43783
orthoMCL 1 0.900 - - OOG6_104959
Panther 1 1.100 - - LDO PTHR46134
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4960
SonicParanoid 1 1.000 - - X3388
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1110.890

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