DRSC/TRiP Functional Genomics Resources

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Protein Alignment drongo and agap1

DIOPT Version :9

Sequence 1:NP_001162848.1 Gene:drongo / 33263 FlyBaseID:FBgn0020304 Length:673 Species:Drosophila melanogaster
Sequence 2:XP_009300560.1 Gene:agap1 / 100148154 ZFINID:ZDB-GENE-130405-1 Length:1255 Species:Danio rerio


Alignment Length:246 Identity:56/246 - (22%)
Similarity:95/246 - (38%) Gaps:58/246 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 NRQCFDCGQKGPTYVNMTIGSFVCTRCSGVLRGL-TPPHRVKSISMATFTQDEIDFLRSHGNELC 90
            |.:|.||..:.|.:.::.:|:.:|..|||:.|.| |...||:|:.:..:..:.|..:.:.||||.
Zfish  1018 NTRCVDCEAQNPDWASLNLGALICIECSGIHRNLGTHLSRVRSLDLDEWPLELIKVMSAIGNELA 1082

  Fly    91 AKTW----LGLWDPKRAVHQQEQRELMMDKYERKRY-------------YLEPASPLKSLANAVN 138
            ...|    .|...|.....::|:...:..|||:|.:             .|..|:..:.|...|.
Zfish  1083 NSVWEANAQGRLKPAPDASREERERWIRAKYEQKLFLASLTCTELSLGQQLLRATAEEDLRLVVI 1147

  Fly   139 L--KSSAPATNHTQNGHQNGYASIHLT--------------------PPAAQRTSANGLQKVANS 181
            |  ..|....|.| .|..:|..::||.                    ...|...:|....:.|||
Zfish  1148 LLAHGSRDEVNET-CGEGDGRTALHLACRKGNVVITQLLVWYGVDIMARDAHSNTALAYARQANS 1211

  Fly   182 SS--------NSSGKTSSSISRPHYNHQNNSQNNNHDAFGLGGGLSSLNSA 224
            ..        ....:....::.|:.:.:||::||:         .||:|||
Zfish  1212 QECMDVLLQYGCPDERYPLMATPNLSRRNNNRNNS---------CSSMNSA 1253

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
drongoNP_001162848.1 ArfGap 15..126 CDD:279720 30/116 (26%)
agap1XP_009300560.1 Centaurin_gamma 439..601 CDD:133303
RAS 440..607 CDD:214541
PH_AGAP 716..989 CDD:241281
PH 719..>783 CDD:278594
PH <933..984 CDD:278594
ArfGap 1008..1118 CDD:279720 29/99 (29%)
Ank_2 1133..1223 CDD:289560 17/90 (19%)
ANK 1133..>1222 CDD:238125 17/89 (19%)
ANK repeat 1165..1196 CDD:293786 3/30 (10%)
ANK repeat 1198..1223 CDD:293786 4/24 (17%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5347
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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