DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment dock and PIN3

DIOPT Version :10

Sequence 1:NP_722657.1 Gene:dock / 33262 FlyBaseID:FBgn0010583 Length:548 Species:Drosophila melanogaster
Sequence 2:NP_015480.1 Gene:PIN3 / 856277 SGDID:S000006358 Length:215 Species:Saccharomyces cerevisiae


Alignment Length:139 Identity:35/139 - (25%)
Similarity:59/139 - (42%) Gaps:34/139 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   270 ELSLTKGTRILILEKSNDGWWRGQSGNSVGWFPSNYTTEDCDNDGEIHTYAMAENVLDIVVALYS 334
            ||...||:.::    |||.:.:........|.|:|....            .:...|:.|.|||.
Yeast    16 ELDFLKGSNVI----SNDVYDQINKSLPAKWDPANAPRN------------ASPASLEYVEALYQ 64

  Fly   335 FTSNNDQELSFEKGDRLEIVDRPASDPDWYKARNNQGQVGLVPRNYLQELNDYLATPYRNASASA 399
            |....|.:|..:.||:::::::  ..|:|||...| |:.|:.|.||::               .|
Yeast    65 FDPQQDGDLGLKPGDKVQLLEK--LSPEWYKGSCN-GRTGIFPANYVK---------------PA 111

  Fly   400 GNGNGGGSN 408
            .:|:.|.||
Yeast   112 FSGSNGPSN 120

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dockNP_722657.1 SH3_Nck_1 154..204 CDD:212699
SH3_Nck_2 256..308 CDD:212700 10/37 (27%)
SH3_Nck_3 328..383 CDD:212701 19/54 (35%)
SH2_Nck_family 446..538 CDD:198196
PIN3NP_015480.1 SH3 58..110 CDD:473055 19/69 (28%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.