DRSC/TRiP Functional Genomics Resources

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Protein Alignment dock and Grb2

DIOPT Version :10

Sequence 1:NP_722657.1 Gene:dock / 33262 FlyBaseID:FBgn0010583 Length:548 Species:Drosophila melanogaster
Sequence 2:NP_110473.2 Gene:Grb2 / 81504 RGDID:619758 Length:217 Species:Rattus norvegicus


Alignment Length:204 Identity:56/204 - (27%)
Similarity:94/204 - (46%) Gaps:63/204 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   330 VALYSFTSNNDQELSFEKGDRLEIVDRPASDPDWYKARNNQGQVGLVPRNYLQELNDYLATPYRN 394
            :|.|.|.:..|.||||::||.|::::... |.:||||..| |:.|.:|:||::            
  Rat     4 IAKYDFKATADDELSFKRGDILKVLNEEC-DQNWYKAELN-GKDGFIPKNYIE------------ 54

  Fly   395 ASASAGNGNGGGSNGGAGGGGGNDSMERRNEGNKPAAQSSGQPIERPNLAGKSWYYGAITRSQCD 459
                                            .||                ..|::|.|.|::.:
  Rat    55 --------------------------------MKP----------------HPWFFGKIPRAKAE 71

  Fly   460 TVLNGHGHDGDFLIRDSETNMGDYSVSLKAPGRNKHFRVHVE-QNMYCIGQRKFHSLDQLVDHYQ 523
            .:|:...|||.||||:||:..||:|:|:|.....:||:|..: ...|.:...||:||::|||:::
  Rat    72 EMLSKQRHDGAFLIRESESAPGDFSLSVKFGNDVQHFKVLRDGAGKYFLWVVKFNSLNELVDYHR 136

  Fly   524 RAPIYTNKQ 532
            ...:..|:|
  Rat   137 STSVSRNQQ 145

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dockNP_722657.1 SH3_Nck_1 154..204 CDD:212699
SH3_Nck_2 256..308 CDD:212700
SH3_Nck_3 328..383 CDD:212701 22/52 (42%)
SH2_Nck_family 446..538 CDD:198196 32/88 (36%)
Grb2NP_110473.2 SH3_GRB2_N 1..56 CDD:212879 22/97 (23%)
SH2_Grb2_like 56..150 CDD:199828 34/106 (32%)
SH3_GRB2_C 160..212 CDD:212882
Blue background indicates that the domain is not in the aligned region.

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