DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment dock and Grap

DIOPT Version :10

Sequence 1:NP_722657.1 Gene:dock / 33262 FlyBaseID:FBgn0010583 Length:548 Species:Drosophila melanogaster
Sequence 2:NP_082093.1 Gene:Grap / 71520 MGIID:1918770 Length:217 Species:Mus musculus


Alignment Length:204 Identity:60/204 - (29%)
Similarity:88/204 - (43%) Gaps:63/204 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   330 VALYSFTSNNDQELSFEKGDRLEIVDRPASDPDWYKARNNQGQVGLVPRNYLQELNDYLATPYRN 394
            ||||||.:....||:|.|||.|:|::. ..|.:|||| ..:|..|.||:||::.           
Mouse     4 VALYSFQATESDELAFNKGDTLKILNM-EDDQNWYKA-ELRGAEGFVPKNYIRV----------- 55

  Fly   395 ASASAGNGNGGGSNGGAGGGGGNDSMERRNEGNKPAAQSSGQPIERPNLAGKSWYYGAITRSQCD 459
                                             ||                ..||.|.|:|...:
Mouse    56 ---------------------------------KP----------------HPWYSGRISRQLAE 71

  Fly   460 TVLNGHGHDGDFLIRDSETNMGDYSVSLKAPGRNKHFRVHVE-QNMYCIGQRKFHSLDQLVDHYQ 523
            ..|....|.|.||||:||::.|::|||:....:.:||:|..| ...|.:.:.||:||::|||.|:
Mouse    72 ETLMKRNHLGAFLIRESESSPGEFSVSVNYGDQVQHFKVLREASGKYFLWEEKFNSLNELVDFYR 136

  Fly   524 RAPIYTNKQ 532
            ...|...:|
Mouse   137 TTTIAKRRQ 145

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dockNP_722657.1 SH3_Nck_1 154..204 CDD:212699
SH3_Nck_2 256..308 CDD:212700
SH3_Nck_3 328..383 CDD:212701 25/52 (48%)
SH2_Nck_family 446..538 CDD:198196 33/88 (38%)
GrapNP_082093.1 SH3_GRAP_N 2..55 CDD:212881 25/52 (48%)
SH2_Grb2_like 56..150 CDD:199828 35/106 (33%)
SH3 162..214 CDD:473055
Blue background indicates that the domain is not in the aligned region.

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