DRSC/TRiP Functional Genomics Resources

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Protein Alignment dock and SYK

DIOPT Version :10

Sequence 1:NP_722657.1 Gene:dock / 33262 FlyBaseID:FBgn0010583 Length:548 Species:Drosophila melanogaster
Sequence 2:NP_003168.2 Gene:SYK / 6850 HGNCID:11491 Length:635 Species:Homo sapiens


Alignment Length:110 Identity:32/110 - (29%)
Similarity:54/110 - (49%) Gaps:27/110 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   435 GQPIERPNLAGK---------------SWYYGAITRSQCD-TVLNGHGHDGDFLIRDSETNMGDY 483
            ||.:|:..::.|               .|::|.|:|.:.: .||.|...:|.||||..:.| |.|
Human   140 GQALEQAIISQKPQLEKLIATTAHEKMPWFHGKISREESEQIVLIGSKTNGKFLIRARDNN-GSY 203

  Fly   484 SVSLKAPGRNKHFRVHVEQNMYCIGQ------RKFHSLDQLVDHY 522
            ::.|...|:..|:|:..::.    |:      :||.:|.|||:||
Human   204 ALCLLHEGKVLHYRIDKDKT----GKLSIPEGKKFDTLWQLVEHY 244

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dockNP_722657.1 SH3_Nck_1 154..204 CDD:212699
SH3_Nck_2 256..308 CDD:212700
SH3_Nck_3 328..383 CDD:212701
SH2_Nck_family 446..538 CDD:198196 29/99 (29%)
SYKNP_003168.2 SH2_N-SH2_Zap70_Syk_like 13..116 CDD:198191
Interdomain A 108..167 4/26 (15%)
SH2_C-SH2_Syk_like 164..262 CDD:198264 28/86 (33%)
Interdomain B 260..370
PTKc_Syk 375..631 CDD:133247
Blue background indicates that the domain is not in the aligned region.

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