DRSC/TRiP Functional Genomics Resources

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Protein Alignment dock and sh3d21

DIOPT Version :10

Sequence 1:NP_722657.1 Gene:dock / 33262 FlyBaseID:FBgn0010583 Length:548 Species:Drosophila melanogaster
Sequence 2:XP_005158368.1 Gene:sh3d21 / 641492 ZFINID:ZDB-GENE-051120-57 Length:497 Species:Danio rerio


Alignment Length:284 Identity:62/284 - (21%)
Similarity:108/284 - (38%) Gaps:66/284 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   187 WRVQNSRNQSGYVPSNYVKKEKPSLFDSIKKKVKKGSGSKTLPNCSPSRQVESPTMSRRLPPDPA 251
            |...:.|.:.|..|.|:||:....|.....::.:  |..||......:|:.|             
Zfish    36 WLEGDLRGKRGMFPGNFVKEVPVYLIGDSNREPR--SIRKTKKTTVQTRKCE------------- 85

  Fly   252 EAIGTAVVKYNYQAQQPDELSLTKGTRILILEKSNDGWWRGQSGNSVGWFPSNYTTE-------D 309
                   |.:.|.....|||.|..|..|.||.:..||||.|:..|.:|.||||:..|       |
Zfish    86 -------VVFPYVPTHEDELQLLVGETIEILREIEDGWWMGKKNNQIGAFPSNFVKEIFVPSKDD 143

  Fly   310 C-----------DNDGEIH----TYAMAENVLDIVVALYSFTSNNDQELSFEKGDRLEIVDRPAS 359
            .           ..:|::.    ......||.:....::.:.:..:.||:.:|||.:.::::...
Zfish   144 AKARPKLSGSVFGKEGKLQQRPSLRKKTSNVKECCQVMFDYAAVAEDELNLKKGDVITVINKSTE 208

  Fly   360 DPDWYKARNNQGQVGLVPRNYLQELNDYLATPYRNASASAGNGNGGGSNGGAGGGGGNDS----- 419
            |..|::...| |:.|..|.|::..:          .:.:...||.|  ......|...||     
Zfish   209 DDGWWEGEVN-GRRGFFPDNFVMLI----------PAETLQTGNAG--QAPVRSGSKKDSENQMP 260

  Fly   420 -MERRNEGNKPAAQSSGQPIERPN 442
             |::.:...||..::.   |::|:
Zfish   261 VMDQNSSDTKPKTETK---IDKPD 281

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dockNP_722657.1 SH3_Nck_1 154..204 CDD:212699 5/16 (31%)
SH3_Nck_2 256..308 CDD:212700 21/51 (41%)
SH3_Nck_3 328..383 CDD:212701 12/54 (22%)
SH2_Nck_family 446..538 CDD:198196
sh3d21XP_005158368.1 SH3_CD2AP-like_1 2..55 CDD:212806 6/18 (33%)
SH3_CD2AP-like_2 83..135 CDD:212807 22/71 (31%)
SH3_D21-like 177..231 CDD:213018 12/54 (22%)
Blue background indicates that the domain is not in the aligned region.

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