DRSC/TRiP Functional Genomics Resources

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Protein Alignment dock and Stacl

DIOPT Version :10

Sequence 1:NP_722657.1 Gene:dock / 33262 FlyBaseID:FBgn0010583 Length:548 Species:Drosophila melanogaster
Sequence 2:NP_001260996.1 Gene:Stacl / 5740318 FlyBaseID:FBgn0263980 Length:1970 Species:Drosophila melanogaster


Alignment Length:542 Identity:119/542 - (21%)
Similarity:182/542 - (33%) Gaps:176/542 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 NIPDSSASS---QQYPQQQQHPPQLPQHQNLNLNQ-----------------------NQNLNQN 49
            :||..|.|.   |:..||||...|..|.|..:|..                       ...|.|.
  Fly   839 DIPIVSVSELALQEQQQQQQQQQQQHQQQQRSLASVAQAAAVRAGRGVRPPPVAMPILGVQLQQQ 903

  Fly    50 QIYQYRPQVPVPVPGSPAHHQRHSSLSQQQQLHHHRTLSTASSCSAQHKSVTFGQPALDCGGNGS 114
            ::.|.|..:|||.....:....||...|:..| ..::||..|..|::    ..||........|:
  Fly   904 ELQQQRGGLPVPSQDISSSSAPHSPRRQKLNL-RMKSLSLDSPESSE----LHGQFRRRTQLPGT 963

  Fly   115 GSANGSGSGNSSSGSAAGNAGTQSMAGNMKHGKSQDDVCYVVAKYDYAAQGAQELDLRKNERYLL 179
            |::..:|||....||          .|:::|.....:                            
  Fly   964 GASTSAGSGYYHGGS----------GGHLEHSTPPSN---------------------------- 990

  Fly   180 LDDSKHWWRVQNSRNQSGYVPSNYVKK----------EKPSLFDSIKKKVKKGSGSKTLPNCSPS 234
                       |||..|...||:..:|          ....|.|.::|.....|.|..|      
  Fly   991 -----------NSRLHSPSSPSHPGRKLLYATRGMRGGSVDLPDEMEKSQSSASTSPCL------ 1038

  Fly   235 RQVESPTMSRRLPPDPAEAIGTAVVKYNYQAQQPDELSLTKGTRILILEKSNDGWWRGQSGNSVG 299
                ||...|.||.:      ..|:.||::|:..|||.|..|.::.:::.|:..||:|:....||
  Fly  1039 ----SPKTHRLLPTN------LYVIIYNFKARHADELDLKAGYKVTVIDNSDPDWWKGKVLGRVG 1093

  Fly   300 WFPSNYTTEDCDNDGEIHTYAMAENVLDIVVALYSFTSNNDQELS-------FEKGDRLE--IVD 355
            :|||.|......|          |..|.:...|....|...:.|:       .:.||.:.  ::.
  Fly  1094 YFPSKYCVRLNAN----------EKPLQVTHNLQVSDSERGENLTLLRDQIVIQTGDEVNGMVMI 1148

  Fly   356 RPASDPDWYKARNNQGQVGLVPRNYLQEL---------NDYLATPYRNASASAGNGNGGGSNGGA 411
            |.|          ..|| |..|..||||:         :|....|::::..::.:...       
  Fly  1149 RAA----------EHGQ-GYCPIKYLQEVXQPEEDEPPSDERDRPHKSSMQTSSSRTA------- 1195

  Fly   412 GGGGGNDSMERR-----NEGNKPAAQSSGQPIERPNLAGKSWYYGAITR-SQCDTV-LN-GHGHD 468
                  |..:||     :|.:..|| ||..|.. |..|..:..:..|.| |..:|. || .:|.:
  Fly  1196 ------DKTKRRIRIVVSENHNVAA-SSVAPAP-PTTAFNTTTHHQIPRESDIETKRLNIDYGDE 1252

  Fly   469 G--------DFLIRDSETNMGD 482
            |        :.||.....|..|
  Fly  1253 GSADWDKDREVLILSGRRNKND 1274

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dockNP_722657.1 SH3_Nck_1 154..204 CDD:212699 6/49 (12%)
SH3_Nck_2 256..308 CDD:212700 19/51 (37%)
SH3_Nck_3 328..383 CDD:212701 13/63 (21%)
SH2_Nck_family 446..538 CDD:198196 12/48 (25%)
StaclNP_001260996.1 C1_Stac 727..777 CDD:410367
PHA03307 869..>1036 CDD:223039 38/220 (17%)
SH3 1051..1102 CDD:473055 19/50 (38%)
YgiM <1067..1154 CDD:442337 22/106 (21%)
Blue background indicates that the domain is not in the aligned region.

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