DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment dock and frk

DIOPT Version :10

Sequence 1:NP_722657.1 Gene:dock / 33262 FlyBaseID:FBgn0010583 Length:548 Species:Drosophila melanogaster
Sequence 2:XP_021324228.2 Gene:frk / 567549 ZFINID:ZDB-GENE-110411-7 Length:512 Species:Danio rerio


Alignment Length:204 Identity:48/204 - (23%)
Similarity:82/204 - (40%) Gaps:66/204 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   328 IVVALYSFTSNNDQELSFEKGDRLEIVDRPASDPDWYKARNNQG----QVGLVPRNYLQELNDYL 388
            :.||||.:|:..|.:|||..||:||.:.:   ..||:.::...|    :.|.:|.||:       
Zfish    56 LYVALYDYTARTDDDLSFNAGDKLEPITK---GEDWWFSKAITGISANKKGYIPANYV------- 110

  Fly   389 ATPYRNASASAGNGNGGGSNGGAGGGGGNDSMERRNEGNKPAAQSSGQPIERPNLAGKSWYYGAI 453
                                                           .|:|  :|..:.||:...
Zfish   111 -----------------------------------------------APVE--SLDAEPWYFPET 126

  Fly   454 TRSQCDTVL-NGHGHDGDFLIRDSETNMGDYSVSLKAPGRNKHFRVHVEQN--MYCIGQRKFHSL 515
            .||..:.:| :.....|.||||:.|:..|:.|:|::...:.||:::....|  .|....|.|.:|
Zfish   127 KRSDAEKMLISQENKKGAFLIRNCESQPGELSLSVRDDVKVKHYKIRKLDNGGYYLSTARNFPTL 191

  Fly   516 DQLVDHYQR 524
            .:||:||.:
Zfish   192 RELVEHYSK 200

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dockNP_722657.1 SH3_Nck_1 154..204 CDD:212699
SH3_Nck_2 256..308 CDD:212700
SH3_Nck_3 328..383 CDD:212701 20/58 (34%)
SH2_Nck_family 446..538 CDD:198196 25/82 (30%)
frkXP_021324228.2 None
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.