DRSC/TRiP Functional Genomics Resources

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Protein Alignment dock and crkl

DIOPT Version :10

Sequence 1:NP_722657.1 Gene:dock / 33262 FlyBaseID:FBgn0010583 Length:548 Species:Drosophila melanogaster
Sequence 2:NP_998703.1 Gene:crkl / 556443 ZFINID:ZDB-GENE-040426-2951 Length:305 Species:Danio rerio


Alignment Length:174 Identity:43/174 - (24%)
Similarity:68/174 - (39%) Gaps:21/174 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly   146 GKSQDDVCYVVAKYDYAAQGAQELDLRKNERYLLLD-DSKHWWRVQNSRNQSGYVPSNYVKK--- 206
            |...::..||...||:....|::|..:|.|..:::| ..:.||..:|...::|.:|..||:|   
Zfish   120 GLGDENQEYVRTLYDFTGSDAEDLPFKKGEILIIMDKPEEQWWSAKNKEGRTGMIPVPYVEKLVR 184

  Fly   207 EKPSLFDSIKKKVKKGSGSKTLPNCSPSRQVESPTMSRRLPPDPAEAI-------------GTAV 258
            ..|....||..  .:.|.|..:|  .||.....|.....:||....|:             ..|:
Zfish   185 SSPHPGQSIHG--SRNSNSYGIP--EPSHAYAQPQTPSPIPPGTPGAVINPLPSVQNGPVLAKAI 245

  Fly   259 VKYNYQAQQPDELSLTKGTRILILEKSNDGWWRGQSGNSVGWFP 302
            .|....|.....|:|..|..:.:...:..|.|.|:..|..|.||
Zfish   246 QKRVPCAYDKTALALEVGDIVKVTRMNISGQWEGEVNNRRGLFP 289

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dockNP_722657.1 SH3_Nck_1 154..204 CDD:212699 14/50 (28%)
SH3_Nck_2 256..308 CDD:212700 13/47 (28%)
SH3_Nck_3 328..383 CDD:212701
SH2_Nck_family 446..538 CDD:198196
crklNP_998703.1 SH2_CRK_like 6..106 CDD:198180
SH3_CRK_N 127..181 CDD:212692 16/53 (30%)
SH3 239..295 CDD:473055 13/51 (25%)
Blue background indicates that the domain is not in the aligned region.

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