DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment dock and grap2a

DIOPT Version :10

Sequence 1:NP_722657.1 Gene:dock / 33262 FlyBaseID:FBgn0010583 Length:548 Species:Drosophila melanogaster
Sequence 2:NP_001017756.1 Gene:grap2a / 550452 ZFINID:ZDB-GENE-050417-275 Length:284 Species:Danio rerio


Alignment Length:302 Identity:72/302 - (23%)
Similarity:106/302 - (35%) Gaps:98/302 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   158 KYDYAAQGAQELDLRKNERYLLLDDSKHWWRVQNSRNQSGYVPSNYVKKEKPSLFDSIKKKVKKG 222
            |||::.....||..||.:...:|.....|::.: .....||||.|||.::.||.|   |:...:|
Zfish     6 KYDFSGTAEDELSFRKGDTLKILGSQDDWFKAE-LHGHEGYVPKNYVDRQIPSWF---KESASRG 66

  Fly   223 SGSKTL------------PNCSP------------------------------------------ 233
            |..:||            ...||                                          
Zfish    67 SAEETLMSREVGAFLIRGSQSSPGDFSISVRHDYDVQHFKVMKDKSGHYYLWTEKFTSLNKLVDF 131

  Fly   234 ------SRQVE------------SPTMSRRLP---PDPAEAIGTAVVKYNYQAQQPDELSLTKGT 277
                  |:|.|            :|...:..|   |.|....|:.... :......|.....||.
Zfish   132 YKTTSISKQKEIFLRDGSGDEPRAPPPIKSQPEVRPPPGGGYGSPQTS-SQNRSTTDPTHNQKGK 195

  Fly   278 RILILEKSNDGWWRGQSGNSVGWFPSNYTTEDCDNDGEIHTYAMAENVLDIVVALYSFTSNNDQE 342
            |..:.||||....:|::.      |:...|.:.         |.|......|.|:|.||:..|.|
Zfish   196 RGSVEEKSNTLGHQGKNS------PAPRRTSET---------APAPRSTIQVRAIYDFTAEEDDE 245

  Fly   343 LSFEKGDRLEIVDRPASDPDWYKARNNQGQVGLVPRNYLQEL 384
            |.|..||.:|::||  ||..|:|.| .:|:.||.|.||.:::
Zfish   246 LGFNSGDIIEVLDR--SDASWWKGR-LRGRSGLFPANYTEQI 284

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dockNP_722657.1 SH3_Nck_1 154..204 CDD:212699 14/45 (31%)
SH3_Nck_2 256..308 CDD:212700 10/51 (20%)
SH3_Nck_3 328..383 CDD:212701 25/54 (46%)
SH2_Nck_family 446..538 CDD:198196
grap2aNP_001017756.1 SH3_GRAP2_N 2..53 CDD:212880 16/47 (34%)
SH2_Grb2_like 54..147 CDD:199828 13/95 (14%)
SH3_GRAP2_C 231..283 CDD:212883 25/54 (46%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.