DRSC/TRiP Functional Genomics Resources

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Protein Alignment dock and fer

DIOPT Version :10

Sequence 1:NP_722657.1 Gene:dock / 33262 FlyBaseID:FBgn0010583 Length:548 Species:Drosophila melanogaster
Sequence 2:XP_012818421.1 Gene:fer / 549656 XenbaseID:XB-GENE-1015488 Length:822 Species:Xenopus tropicalis


Alignment Length:95 Identity:32/95 - (33%)
Similarity:52/95 - (54%) Gaps:9/95 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly   438 IERPNLAGKSWYYGAITRSQCDTVLNGHGHDGDFLIRDSETNMGDYSVSLKAPGRNKHFRVHVEQ 502
            ||:| |:.:.||:|||.|.:...:|.   ..||||:|:|....|:|.:|:.:..:.:||.:....
 Frog   451 IEKP-LSEQDWYHGAIPRVEAQELLK---QQGDFLVRESHGKPGEYVLSVFSDSQRRHFIIQFAD 511

  Fly   503 NMYCIGQRKFHSLDQLVDHYQRAPIYTNKQ 532
            |.|......|.::.||::|:     ||.||
 Frog   512 NQYRFEGTGFPTIPQLIEHH-----YTTKQ 536

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dockNP_722657.1 SH3_Nck_1 154..204 CDD:212699
SH3_Nck_2 256..308 CDD:212700
SH3_Nck_3 328..383 CDD:212701
SH2_Nck_family 446..538 CDD:198196 28/87 (32%)
ferXP_012818421.1 F-BAR_Fer 5..238 CDD:153370
SH2_Fps_family 453..538 CDD:198224 30/93 (32%)
Protein Kinases, catalytic domain 566..815 CDD:473864
Blue background indicates that the domain is not in the aligned region.

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