DRSC/TRiP Functional Genomics Resources

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Protein Alignment dock and grb2

DIOPT Version :10

Sequence 1:NP_722657.1 Gene:dock / 33262 FlyBaseID:FBgn0010583 Length:548 Species:Drosophila melanogaster
Sequence 2:NP_001008130.1 Gene:grb2 / 493492 XenbaseID:XB-GENE-6070000 Length:229 Species:Xenopus tropicalis


Alignment Length:221 Identity:60/221 - (27%)
Similarity:102/221 - (46%) Gaps:68/221 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   330 VALYSFTSNNDQELSFEKGDRLEIVDRPASDPDWYKARNNQGQVGLVPRNYLQELNDYLATPYRN 394
            ||.|.|.:..|.||||::||.|::::... |.:||||..| |:.|.:|:||::            
 Frog     4 VAKYDFKATADDELSFKRGDILKVLNEEC-DQNWYKAELN-GKDGFIPKNYIE------------ 54

  Fly   395 ASASAGNGNGGGSNGGAGGGGGNDSMERRNEGNKPAAQSSGQPIERPNLAGKSWYYGAITRSQCD 459
                                            .||                ..|::|.|.|::.:
 Frog    55 --------------------------------MKP----------------HPWFFGKIPRAKAE 71

  Fly   460 TVLNGHGHDGDFLIRDSETNMGDYSVSLKAPGRNKHFRVHVE-QNMYCIGQRKFHSLDQLVDHYQ 523
            .:|....|||.||||:||:..||:|:|:|.....:||:|..: ...|.:...||:||::|||:::
 Frog    72 EMLGKQRHDGAFLIRESESAPGDFSLSVKFGNDVQHFKVLRDGAGKYFLWVVKFNSLNELVDYHR 136

  Fly   524 RAPIYTNKQGEKLYL--VRSLPKANG 547
            ...:..|:|   ::|  :..:|:.:|
 Frog   137 STSVSRNQQ---IFLRDIEQVPQVHG 159

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dockNP_722657.1 SH3_Nck_1 154..204 CDD:212699
SH3_Nck_2 256..308 CDD:212700
SH3_Nck_3 328..383 CDD:212701 23/52 (44%)
SH2_Nck_family 446..538 CDD:198196 32/92 (35%)
grb2NP_001008130.1 SH3_GRB2_N 1..56 CDD:212879 23/97 (24%)
SH2_Grb2_like 56..150 CDD:199828 35/112 (31%)
SH3_GRB2_C 172..224 CDD:212882
Blue background indicates that the domain is not in the aligned region.

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