DRSC/TRiP Functional Genomics Resources

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Protein Alignment dock and crk

DIOPT Version :10

Sequence 1:NP_722657.1 Gene:dock / 33262 FlyBaseID:FBgn0010583 Length:548 Species:Drosophila melanogaster
Sequence 2:NP_001003628.1 Gene:crk / 445234 ZFINID:ZDB-GENE-040801-148 Length:311 Species:Danio rerio


Alignment Length:180 Identity:52/180 - (28%)
Similarity:89/180 - (49%) Gaps:32/180 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   327 DIVVALYSFTSNNDQELSFEKGDRLEIVDRPASDPDWYKARNNQGQVGLVPRNYLQELNDYLATP 391
            :.|.||:.|..|:|::|.|.|||.|.::::|  :..|:.|:|::|:||::|..|:::        
Zfish   136 EYVRALFDFPGNDDEDLPFRKGDVLRVLEKP--EEQWWNAQNSEGRVGMIPVPYVEK-------- 190

  Fly   392 YRNASASAGNGNGGGSNGGAGGGGGNDSMERRNEGNKPAAQSSG---QPIERPNLAGKSWYYGAI 453
            ||.||.:  :|..|.|..|:|..|.:|.   .:..:.|.....|   ||...|||.....|..||
Zfish   191 YRPASPT--SGAPGVSVSGSGAHGNSDG---HSTQSPPLLGEPGQYAQPTSLPNLQNGPVYARAI 250

  Fly   454 TRSQCDTVLNGHGHD------GDFLIRDSETNM-GDYSVSLKAPGRNKHF 496
            .:    .|.|.:...      || :::.::.|: |.:....|  |::.||
Zfish   251 QK----RVPNAYDKTALALEVGD-MVKVTKINVNGQWEGECK--GKHGHF 293

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dockNP_722657.1 SH3_Nck_1 154..204 CDD:212699
SH3_Nck_2 256..308 CDD:212700
SH3_Nck_3 328..383 CDD:212701 21/54 (39%)
SH2_Nck_family 446..538 CDD:198196 13/58 (22%)
crkNP_001003628.1 SH2_CRK_like 5..115 CDD:198180
SH3_CRK_N 136..190 CDD:212692 21/55 (38%)
SH3_CRK_C 244..300 CDD:212693 13/57 (23%)
Blue background indicates that the domain is not in the aligned region.

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