DRSC/TRiP Functional Genomics Resources

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Protein Alignment dock and Shark

DIOPT Version :10

Sequence 1:NP_722657.1 Gene:dock / 33262 FlyBaseID:FBgn0010583 Length:548 Species:Drosophila melanogaster
Sequence 2:NP_524743.2 Gene:Shark / 44353 FlyBaseID:FBgn0015295 Length:939 Species:Drosophila melanogaster


Alignment Length:108 Identity:38/108 - (35%)
Similarity:56/108 - (51%) Gaps:12/108 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly   448 WYYGAITRSQCDTVLNGHGHDGDFLIRDSETNMGDYSVSLKAPGRNKHFRV--HVEQNMYC---- 506
            ||:|.::|...|.:|.....||.||:|:|.|..||:.:||...|...|::|  |..::.:.    
  Fly    10 WYHGNLSREAADELLKQGYEDGTFLVRESSTAAGDFVLSLLCQGEVCHYQVRRHGGEDAFFSIDD 74

  Fly   507 -IGQRKFHSLDQLVDHYQRAPIYTNKQGEKLY--LVRSLPKAN 546
             :..:..|.||.|||:||:|   .|....||.  |:|.||..|
  Fly    75 KVQTKILHGLDTLVDYYQQA---ANGLPTKLTVPLIRDLPPHN 114

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dockNP_722657.1 SH3_Nck_1 154..204 CDD:212699
SH3_Nck_2 256..308 CDD:212700
SH3_Nck_3 328..383 CDD:212701
SH2_Nck_family 446..538 CDD:198196 33/98 (34%)
SharkNP_524743.2 SH2_Nterm_shark_like 8..91 CDD:198210 27/80 (34%)
ANKYR <94..317 CDD:440430 9/24 (38%)
ANK repeat 124..151 CDD:293786
ANK repeat 153..184 CDD:293786
ANK repeat 186..217 CDD:293786
ANK repeat 220..245 CDD:293786
SH2_Cterm_shark_like 287..395 CDD:198211
PTKc_Syk_like 666..926 CDD:270650
Blue background indicates that the domain is not in the aligned region.

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